Job Description P0A6G7 Confidence 98.83% Date Thu Jan 5 11:03:07 GMT 2012 Rank 85 Aligned Residues 139 % Identity 15% Template c2pg8C_ PDB info PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.														.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	D	H	M	A	N	L	I	V	A	Q	M	L	F	L	E	A	E	N	P	E	K	D	I	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	N	S	P	G	G	V	I	T	A	G	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	G	Q	Q	V	D	D	M	E	T	A	V	D	L	A	L	L	D	P	G	V	R	V	G	L	L	R	G	G	V	M	S	H	P	R	Y	R	G	K	R	V	F	S	A	G	I	N	L	K	Y	L	S	Q	G	G	I	S	L	V	D	F	L	M	R	K	E	L	G	Y	I	H	K	L	V	R	G	V	L	T
Template Known Secondary structure		B		T	T																T	T										B			S	G	G	G	T	T		B						B								T				T	T	T	T							T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	I	Y	D	T	M	Q	F	I	K	P	D	V	S	T	I	C	M	G	Q	A	A	S	M	G	A	F	L	L	T	A	G	A	K	G	K	R	F	C	L	P	N	S	R	V	M	I	H	Q	P	L	G	G	Y	Q	G	Q	A	T	D	I	E	I	H	A	R	E	I	L	K	V	K	G	R	M	N
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																	.	.																											.													.	.
Template Conservation																																							.	.																											.													.	.
Template Sequence		N	D	D	R	P	G	W	W	H	S	P	R	I	E	K	P	W	V	A	A	V	D	G	F	A	I	G	G	G	A	Q	L	L	L	V	F	D	.	.	R	V	L	A	S	S	D	A	Y	F	S	L	P	A	A	K	E	G	I	I	P	G	A	A	N	L	.	R	L	G	R	F	A	G	P	R	V	S	R	.	.
Template Known Secondary structure			T	T	S	T	T	T	T	T		S											S	S				T						T	T	S		S	.	.						T	T									S	S	S				T	T				.													.	.
Template Predicted Secondary structure																																							.	.																											.													.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	M	A	L	H	T	G	Q	S	L	E	Q	I	E	R	D	T	E	R	D	R	F	L	S	A	P	E	A	V	E	Y	G	L	V	D	S	I	L	T	H	R	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	I	L	E	G	R	R	I	W	A	K	E	P	E	A	R	L	L	V	D	E	V	V	E	P	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S						T	T	S	G	G	G	G	G	T		S					T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions