 |
Job Description | P0A6G7 | Confidence | 25.73% | Date | Thu Jan 5 11:03:07 GMT 2012 |
Rank | 144 | Aligned Residues | 87 |
% Identity | 20% | Template | c2pc9B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:phosphoenolpyruvate carboxykinase [atp]; |
PDBTitle: crystal structure of atp-dependent phosphoenolpyruvate carboxykinase2 from thermus thermophilus hb8
|
Resolution | 2.40 Å |
|
 |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | M | S | I | Y | D | T | M | Q | F | I | K | P | D | V | S | T | I | C | M | G | Q | A | A | S | M | G | A | F | L | L | T | A | G | A | K | G | K | R | F | C | L | P | N | S | R | V | M | I | H | Q | P | L | G | G | Y | Q | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|
|
|   |
|   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|   |   | . | . | . | . | . | . | . |   |   |
|   |
|
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|   |
Template Sequence |   |
A | R | M | L | G | E | K | I | R | K | H | A | P | R | V | Y | L | V | N | T | G | W | T | G | G | P | Y | . |
. |
. |
. |
. |
. |
. |
G | V | G | Y | R | F | P | L | P | V | T | R | A | L | L | K | A | A | L | S | G | A | L | E | N | V | P | Y | R | R | D | P | V | F | G | F | E | V | P | L | E | A | P | G | V | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| S |  |  | S | S | S | B | . | . | . | . | . | . | . | T | T | B |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | S |
|  |  |
|
| T | T | T |
|
| B |  |  | S |
| B | T | T | B |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
407 | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
Q | A | T | D | I | E | I | H | A | R | E | I | L | K | V | K | G | R | M | N | E | L | M | A | L | H | T | G | Q | S | L | E | Q | I | E | R |
Query Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
Q | E | L | L | N | P | R | E | T | W | A | D | K | E | A | Y | D | Q | Q | A | R | K | L | A | R | L | F | Q | E | N | F | Q | K | Y | A | S | G | V | A | K | E | V | A | E |
Template Known Secondary structure |   |
T | T | T | T |
| T | T | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|