|   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
110 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
T | G | Q | V | E | D | H | M | A | N | L | I | V | A | Q | M | L | F | L | E | A | E | N | P | E | K | D | I | Y | L | Y | I | N | S | P | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | I | T | A | G | M | S | I | Y | D | T | M | Q | F | I | K | P | D | V | S | T | I | C | M | G | Q | A | . |
. |
A | S | M | G |
Query Conservation |   |
  |
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |
| . | . |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   | . |   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|
|
|   |
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|
Template Sequence |   |
G | Q | V | W | H | P | N | S | A | F | K | T | A | Q | A | I | N | D | F | N | N | G | E | . |
Q | L | P | X | X | I | L | A | N | W | R | G | F | S | G | G | Q | R | D | X | F | N | E | V | L | K | Y | G | S | F | I | V | D | A | L | V | D | Y | K | Q | P | I | I | I | Y | I | P | P | T | G | E | L | R | G | G | S |
Template Known Secondary structure |   |
T | T |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . |
|
|
|  |  |  |
|
|
|
|
|  |  |
|
| S |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1921 | . | . | . | . | . | . | . | . | 1930 | . | . | . | . | . | . | . | . | . | 1940 | . | . | . | |
. | . | . | . | . | . | 1950 | . | . | . | . | . | . | . | . | . | 1960 | . | . | . | . | . | . | . | . | . | 1970 | . | . | . | . | . | . | . | . | . | 1980 | . | . | . | . | . | . | . | . | . | 1990 | . | . | . | . | . | . | . | . | . |
  |
  |   |
114 | . | . | . | . | . | 120 | |
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | L | L | T | A | G | . |
. |
. |
A | K | G | K | R | F | C | L | P | N | S | R | V | M | I | H | Q | P | L | G | G | Y | Q | . |
. |
G | Q | A | T | D | I | E | I | H | A | R | E | I | L | K | V | K | G | R | M | N | E | L | M | A | L | H | T | G | Q | S | L | E | Q | I | E | R | D | T | E | R | D | R | F | L |
Query Conservation |   |
  |   |
|   |   |
|
| . | . | . |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   | . | . |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |
| . | . | . | . | . |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . |   |
|   |   |
|
| . |   |
|
|
|
Template Sequence |   |
W | V | V | V | D | P | T | I | N | A | D | Q | X | E | X | Y | A | D | V | N | A | R | A | G | V | L | E | P | Q | G | X | V | G | I | K | F | R | R | E | K | L | L | D | T | X | N | R | L | E | . |
. |
. |
. |
. |
L | L | P | I | Y | G | Q | . |
. |
. |
. |
. |
. |
. |
. |
I | S | L | Q | F | A | . |
D | L | H | D |
Template Known Secondary structure |   |
 | G | G | G |
| G | G | G | G | T | T | T |  |  |  |  |  |  | T | T |
|  |  |  | S | S |
|  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2000 | . | . | . | . | . | . | . | . | . | 2010 | . | . | . | . | . | . | . | . | . | 2020 | . | . | . | . | . | . | . | . | . | 2030 | . | . | . | . | . | . | . | . | . | 2040 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 2050 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 2060 | . | |
. | . | . | . |
  |
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | P | E | A | V | E | Y | G | L | V | D | S | I | L | T |
Query Conservation |   |
|
|   |
|
|   |   |   |
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |
|   |
|   |   |
|
|   |
Template Sequence |   |
R | S | S | R | X | V | A | K | G | V | I | S | K | E | L | E |
Template Known Secondary structure |   |
S |  |  |  |  |  |  | T | T |
| S | S |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2099 | 2100 | . | . | . | . | . | . | . | . | . | 2110 | . | . | . | . |
  |