Return to main results Retrieve Phyre Job Id

Job DescriptionP68646
Confidence99.76%DateWed Jan 25 15:21:01 GMT 2012
Rank1Aligned Residues88
% Identity19%Templated2gmha3
SCOP infoFerredoxin-like 4Fe-4S ferredoxins ETF-QO domain-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.... .....20......... 30..... ....40.........50... ......60.........70...
Predicted Secondary structure 



.










.....





.







.....






Query SS confidence 








.














. . . . .





.

















. . . . .



















Query Sequence  NVDVKLGVN. KFNVDEEHPHIVVKA. . . . . DADKQA. LELLVKACPAGLYKKQDD. . . . . GSVRFDYAGCLECGTCRILG
Query Conservation   
  

   .          
 
  .....  
  
.   
   

  

     .....
 
 
    

 

 
   
Alig confidence 








.














.....





.

















.....



















Template Conservation 
       

       
 

 
    
    
    

 
   

  

              
    

 

 
   
Template Sequence  DLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKD
Template Known Secondary structure 
TTT
B

SSS

SSSTTT

T
TT


SSTT

GGG





Template Predicted Secondary structure 



















































Template SS confidence 















































































   484.....490.........500.........510.........520.........530.........540.........550.........560...
 
   74.....80.........90....
Predicted Secondary structure 













Query SS confidence 




















Query Sequence  LGSALEQWEYPRGTFGVEFRY
Query Conservation 
  

     
 
  

 
  
Alig confidence 





.













Template Conservation 
  

 .   
 

 
  
  
Template Sequence  PSQNIN. WVVPEGGGGPAYNG
Template Known Secondary structure  TT

.


STT
B


S
Template Predicted Secondary structure 



.











Template SS confidence 




















   564..... 570.........580...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions