 |
Job Description | P68646 | Confidence | 99.09% | Date | Wed Jan 25 15:21:01 GMT 2012 |
Rank | 25 | Aligned Residues | 53 |
% Identity | 23% | Template | d2fdna_ |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Short-chain ferredoxins
|
Resolution | 0.94 |
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | K | A | D | A | D | K | Q | A | L | E | L | L | V | K | A | C | P | A | G | L | Y | K | K | Q | D | D | G | S | V | R | F | D | Y | A | G | C | L | E | C | G | T | C | R | I | L | G | L | G | S | A | L | E | Q |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |
| . |   |   |
|   |   |   |
|
|   |   |
|
|   | . |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
Y | V | I | N | E | A | C | I | S | C | . |
G | A | C | E | P | E | C | P | V | N | A | I | S | . |
S | G | D | D | R | Y | V | I | D | A | D | T | C | I | D | C | G | A | C | A | G | V | C | P | V | D | A | P | V | Q |
Template Known Secondary structure |   |
 |  |  |
| T | T |
|
|
|
| . |
| T | T | G | G | G |
| T | T |
|
|  |  | . |
|
| S | S | S |
|  |  |
| T | T | T |
|
|
|
|
|  |  |  |  | T |
| T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|