Job Description P56258 Confidence 17.80% Date Thu Jan 5 12:06:20 GMT 2012 Rank 47 Aligned Residues 298 % Identity 10% Template c3rhzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nucleotide sugar synthetase-like protein; PDBTitle: structure and functional analysis of a new subfamily of2 glycosyltransferases required for glycosylation of serine-rich3 streptococcal adhesions Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	V	L	I	H	V	L	G	S	D	I	P	H	H	N	R	T	V	L	R	F	F	N	D	A	L	A	A	T	S	E	H	A	R	E	F	M	V	V	G	K	D	D	G	L	S	D	S	C	P	A	L	S	V	Q	F	F	P	G	K	K	S	L	A	E	A	V	I	A	K	A	K	A	N	R	Q	Q	R	F
Query Conservation
Alig confidence																		.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	Y	I	T	N	I	N	G	Q	S	I	Q	S	T	.	.	.	A	Q	L	C	Q	N	T	V	T	D	V	A	V	S	L	G	Y	R	E	L	G	I	Y	C	Y	Q	I	H	T	D	.	.	.	.	.	.	.	.	.	.	S	E	S	E	L	S	K	R	L	D	G	I	V	A	G	L	R	H	G	D	V
Template Known Secondary structure											S	S		T	T			.	.	.															T	T											G	G	G	S	.	.	.	.	.	.	.	.	.	.													T	T	T			T	T
Template Predicted Secondary structure																		.	.	.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		F	F	.	.	.	.	H	G	Q	F	N	P	T	L	W	L	A	L	L	S	G	G	I	K	P	S	Q	F	F	W	H	I	W	G	A	D	L	Y	E	L	S	S	G	L	R	Y	K	L	F	Y	P	L	R	R	L	A	Q	K	R	V	G	C	V	F	A	T	R	G	D	L	S	F	F	A	K	T	H	P	K	V
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																															.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		V	I	F	Q	T	P	T	W	N	T	T	E	F	D	E	K	L	M	N	K	L	K	L	Y	D	I	K	I	V	L	F	I	H	D	V	V	.	.	.	.	.	.	P	L	M	N	F	Y	L	M	D	R	T	I	A	Y	Y	N	K	A	D	V	V	V	A	P	S	Q	K	M	I	D	K	L	R	D	F	G	M	N
Template Known Secondary structure									S	S													T	T	S	S								S			G	.	.	.	.	.	.	G	G			G	G	G									T	T		S					S											T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	L	L	F	F	P	T	R	M	D	P	S	L	N	T	M	A	N	D	R	Q	R	E	G	K	M	T	I	L	V	G	N	S	G	D	R	S	N	E	H	I	A	A	L	R	A	V	H	Q	Q	F	G	D	T	V	K	V	V	V	P	M	G	Y	P	P	N	N	E	A	Y	I	E	E	V	R	Q	A	G
Query Conservation
Alig confidence											.	.	.																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	K	T	V	V	Q	G	M	.	.	.	W	D	H	P	T	Q	A	P	M	F	P	A	L	K	R	E	I	H	F	P	G	N	P	E	R	F	S	F	.	.	.	.	.	.	.	.	.	V	K	E	W	K	Y	D	I	P	L	K	V	Y	T	W	Q	N	V	E	L	P	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S							S	.	.	.																					S		T	T	T		G	G	.	.	.	.	.	.	.	.	.	G	G	G				S	S							S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.								.
Query SS confidence																																						.	.	.	.	.	.								.
Query Sequence		L	E	L	F	S	E	E	N	L	Q	I	L	S	E	K	L	E	F	D	A	Y	L	A	L	L	R	Q	C	D	L	G	Y	F	I	F	A	.	.	.	.	.	.	R	Q	Q	G	I	G	T	.	L	C	L	L	I	Q	A	G	I	P	C	V	L	N	R	E	N	P	F	W	Q	D	M	T	E	Q	H	L	P	V
Query Conservation																																						.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.							.																								.	.	.	.	.	.								.
Template Conservation		.	.	.	.	.	.							.
Template Sequence		.	.	.	.	.	.	Q	N	V	H	K	I	.	N	Y	R	P	D	E	Q	L	L	M	E	M	S	Q	G	G	F	G	L	V	W	M	D	D	K	D	K	E	Y	Q	S	L	Y	C	S	Y	K	L	G	S	F	L	A	A	G	I	P	V	I	V	Q	E	G	I	A	N	Q	E	L	I	E	N	N	G	L	G	W
Template Known Secondary structure		.	.	.	.	.	.	T	T					.													T	T	S	S								G	G	G					T	T	S												T							T	T		T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.							.
Template SS confidence
								204	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		310	.	.	.										.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.
Query Sequence		L	F	T	T	.	.	.	.	.	.	.	.	.	D	D	L	N	E	D	I	V	R	E	A	Q	R	Q	L	A	S	V	D	K	N	T	I	A	F	F	S	P	N	Y	L	Q	G
Query Conservation						.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	K	D	V	E	E	A	I	M	K	V	K	N	V	N	E	D	E	Y	I	E	L	V	K	N	V	R	S	F	N	P	I	L	R	K	G	F	F	T	R	R	L	L	T	E
Template Known Secondary structure				S	S																											T					T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions