Job Description P56258 Confidence 97.47% Date Thu Jan 5 12:06:20 GMT 2012 Rank 2 Aligned Residues 339 % Identity 12% Template c3ot5D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		L	I	H	V	L	G	S	D	I	P	H	H	N	R	T	V	L	R	F	F	N	D	A	L	A	A	T	S	E	H	A	R	E	F	M	V	V	G	K	D	D	G	L	S	D	S	C	P	A	L	S	V	Q	F	F	P	G	K	K	.	.	.	.	.	.	.	.	S	L	A	E	A	V	I	A	K	A	K	A	N
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence									.							.	.																																												.	.	.	.	.	.	.	.
Template Conservation									.							.	.
Template Sequence		V	M	S	I	F	G	T	.	R	P	E	A	I	K	.	.	M	A	P	L	V	L	A	L	E	K	E	P	E	T	F	E	S	T	V	V	I	T	A	M	L	D	Q	V	L	E	I	F	D	I	K	P	D	I	D	L	D	I	G	Q	T	L	A	E	I	T	S	R	V	M	N	G	I	N	E	V	I	A	A	E
Template Known Secondary structure								S	.							.	.										T		T	T	T																		T	T				S
Template Predicted Secondary structure									.							.	.
Template SS confidence
		6	.	.	.	10	.	.		.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Q	R	F	F	F	H	G	Q	F	N	P	T	L	W	L	A	L	L	S	G	G	I	K	P	S	Q	F	F	W	H	I	W	G	A	D	L	Y	E	L	S	S	G	L	R	Y	K	L	F	Y	P	L	R	R	L	A	Q	K	R	V	G	C	V	F	A	T	R	G	D	L	S	F	F	A	K	T	H	P	K
Query Conservation
Alig confidence															.																																					.	.	.
Template Conservation															.																																					.	.	.
Template Sequence		N	P	D	I	V	L	V	H	G	D	T	T	T	.	S	F	A	A	G	L	A	T	F	Y	Q	Q	K	M	L	G	H	V	E	A	G	L	R	T	W	N	K	Y	S	P	F	P	E	E	M	N	.	.	.	R	Q	L	T	G	V	M	A	D	I	H	F	S	P	T	K	Q	A	K	E	N	L	L	A	E	G	K
Template Known Secondary structure				S						T	T				.											T	T							S						S		T	T	T	T	T	T					.	.	.									S					S	S										T	T
Template Predicted Secondary structure															.																																					.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		V	R	G	E	L	L	F	F	P	T	R	M	D	.	.	.	.	.	.	.	.	.	P	S	L	N	T	M	A	N	D	R	Q	R	E	G	K	M	T	I	L	V	G	N	S	G	D	R	S	N	E	H	I	A	A	L	R	A	V	H	Q	Q	F	G	D	T	V	K	V	V	V	P	M	G	Y	P	P	N	N	E
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																																						.
Template Conservation																																																																													.
Template Sequence		D	P	A	T	I	F	V	T	G	N	T	A	I	D	A	L	K	T	T	V	Q	K	D	Y	H	H	P	I	L	E	N	L	G	D	N	R	L	I	L	M	T	A	H	R	R	E	N	L	G	E	P	M	Q	G	M	F	E	A	V	R	E	I	V	E	S	R	E	D	T	E	L	V	Y	P	M	.	H	L	N	P
Template Known Secondary structure			G	G	G											T					S		T	T								S		T	T															S	T																	T	T								.		S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	I	E	E	V	R	Q	A	G	L	E	L	F	S	E	E	N	L	Q	I	L	S	E	K	L	E	F	D	A	Y	L	A	L	L	R	Q	C	D	L	G	Y	F	I	F	A	R	Q	Q	G	I	G	T	L	C	L	L	I	Q	A	G	I	P	C	V	L	N	R	E	N	P	F	W	Q	D	M	T	E	Q	H
Query Conservation
Alig confidence															.	.	.							.																							.	.	.	.	.
Template Conservation															.	.	.							.																							.	.	.	.	.
Template Sequence		A	V	R	E	K	A	M	A	I	L	G	G	H	.	.	.	E	R	I	H	L	I	.	E	P	L	D	A	I	D	F	H	N	F	L	R	K	S	Y	L	V	F	T	D	S	.	.	.	.	.	G	G	V	Q	E	E	A	P	G	M	G	V	P	V	L	V	L	R	D	T	T	E	R	P	E	G	I	E	A	G
Template Known Secondary structure												T	T		.	.	.	T	T					.																							.	.	.	.	.							G	G	G	G	T								S	S		S							T	T
Template Predicted Secondary structure															.	.	.							.																							.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		L	P	V	L	F	T	T	D	D	L	N	E	.	.	.	.	D	I	V	R	E	A	Q	R	Q	L	A	S	V	D	K	N	T	I	A	F	F	S	P	N	Y	L	Q	G	W	Q	R	A	L	A	I	A	A	R	E	V	A
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		T	L	K	L	I	G	T	N	K	E	N	L	I	K	E	A	L	D	L	L	D	N	K	E	S	H	D	K	M	A	Q	A	A	N	P	Y	G	D	G	F	A	A	N	R	I	L	A	A	I	K	S	H	F	E	E	T	D
Template Known Secondary structure		S						S																									S			T	T			S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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