 |
Job Description | P56258 | Confidence | 13.01% | Date | Thu Jan 5 12:06:20 GMT 2012 |
Rank | 60 | Aligned Residues | 44 |
% Identity | 16% | Template | c3jrnA_ |
PDB info |
PDB header:plant protein | Chain: A: PDB Molecule:at1g72930 protein; |
PDBTitle: crystal structure of tir domain from arabidopsis thaliana
|
Resolution | 2.00 Å |
|
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
|
|
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |
|
|  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | V | L | F | T | T | D | D | L | N | E | D | I | V | R | E | . |
. |
. |
A | Q | R | Q | L | A | S | V | D | K | N | T | I | A | F | F | S | P | N | Y | L | Q | G | W | Q | R | A | L | A | I | A | A | R |
Query Conservation |   |
  |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
| . | . |   |
|   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
M | P | I | F | Y | . |
. |
G | V | E | P | N | H | V | R | W | Q | T | G | V | L | A | E | Q | F | K | K | H | A | S | . |
. |
. |
. |
R | E | D | P | E | K | V | L | K | W | R | Q | A | L | T | N | F | A | Q |
Template Known Secondary structure |   |
 |  |  |  |
| . | . | S | S |
|  |  |  |  |  |  | T |
| T |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | |
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|