Job Description P56258 Confidence 96.53% Date Thu Jan 5 12:06:20 GMT 2012 Rank 5 Aligned Residues 256 % Identity 14% Template c2xmpB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret mutant e326a2 from p.horishiki in complex with udp Resolution 2.50 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	F	H	G	Q	F	N	P	T	L	W	L	A	L	L	S	G	G	I	K	P	S	Q	F	F	W	H	I	W	G	A	D	L	Y	E	L	S	S	G	L	R	Y	K	L	F	Y	P	L	R	R	L	A	Q	K	R	V	G	C	V	F	A	T	R	G	D	L	S	F	F	A	K	T	H	P	K	V	R	G	E
Query Conservation
Alig confidence											.	.	.	.																																		.	.	.	.	.	.																	.	.	.	.
Template Conservation											.	.	.	.																																		.	.	.	.	.	.																	.	.	.	.
Template Sequence		V	L	V	H	D	P	Q	P	A	.	.	.	.	A	L	I	E	F	Y	E	K	K	S	P	W	L	W	R	C	H	I	D	L	S	S	P	N	R	E	F	W	E	F	L	R	R	.	.	.	.	.	.	F	V	E	K	Y	D	R	Y	I	F	H	L	P	E	Y	V	.	.	.	.	Q	P	E	L	D	R	N	K
Template Known Secondary structure						S	S	T	T	G	.	.	.	.	G	G	G	G	S	S				S								S			S	S												.	.	.	.	.	.			T	T	S	S					S	S	T	T	S		.	.	.	.		T	T	S		G	G	G
Template Predicted Secondary structure											.	.	.	.																																		.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		L	L	F	F	P	T	R	M	D	P	S	L	N	T	M	A	N	D	R	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	M	T	I	L	V	G	N	S	G	D	R	S	N	E	H	I	A	A	L	R	A	V	H	Q	Q	.	.	F	G	D	T	V	K	V	V	V	P	M	G	Y	P	P	N	N
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		A	V	I	M	P	P	S	I	D	P	L	S	E	K	N	V	E	L	K	Q	T	E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	I	P	G	V	Q	L	L	L	V	G	V	M	A	H	D	D
Template Known Secondary structure									B		T	T	S	T	T	T	S														T	T			T	T	S										S	T	T	S																	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		E	A	Y	I	E	E	V	R	Q	A	G	L	E	L	F	S	E	E	N	L	Q	I	.	.	L	S	E	K	L	E	F	D	A	Y	L	A	L	L	R	Q	C	D	L	G	Y	F	I	F	A	R	Q	Q	G	I	G	T	L	C	L	L	I	Q	A	G	I	P	C	V	L	N	R	E	N	P	F	W	Q	D	M	T
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		P	E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	I	L	Q	M	S	I	R	A	G	F	G	L	T	V	T	E	A	M	W	K	G	K	P	V	I	G	R	A	V	G	G	I	K	F	Q	I	V
Template Known Secondary structure																T	T		T	T						G	G	G	T												T		S							S	S		S	S										T	T							S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.										.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.											.	.
Query SS confidence												.	.	.	.	.	.	.	.	.											.	.
Query Sequence		E	Q	H	L	P	V	L	F	T	T	.	.	.	.	.	.	.	.	.	D	D	L	N	E	D	I	V	R	E	.	.	A	Q	R	Q	L	A	S	V	D	K	N	T	I	A	F	F	S	P	N	Y	L	Q	G	W	Q	R	A	L	A
Query Conservation												.	.	.	.	.	.	.	.	.											.	.
Alig confidence												.	.	.	.	.	.	.	.	.											.	.												.	.	.
Template Conservation																																												.	.	.
Template Sequence		D	G	E	T	G	F	L	V	R	D	A	N	E	A	V	E	V	V	L	Y	L	L	K	H	P	E	V	S	K	E	M	G	A	K	A	K	E	R	V	R	K	N	.	.	.	F	I	I	T	K	H	M	E	R	Y	L	D	I	L	N
Template Known Secondary structure		B	T	T	T					S	S																																	.	.	.	T	B
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.				.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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