Job Description P56258 Confidence 96.48% Date Thu Jan 5 12:06:20 GMT 2012 Rank 6 Aligned Residues 167 % Identity 12% Template c2vsnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:xcogt; PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation Resolution 2.75 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	G	N	S	G	D	R	S	N	E	H	I	A	A	L	R	A	V	H	Q	Q	F	G	D	T	V	K	V	V	V	P	M	G	Y	P	P	N	N	E	A	Y	I	E	E	V	R	Q	A	G	L	E	L	F	S	E	E	N	L	Q	I	L	S	E	K	L	E	F	D	A	Y	L	A	L	L	R	Q	C	D
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		V	V	L	C	C	F	N	N	S	Y	K	L	N	P	Q	S	M	A	R	M	L	A	V	L	R	E	V	P	D	S	V	L	W	L	L	S	.	.	G	P	G	E	A	D	A	R	L	R	A	F	A	H	A	Q	G	V	D	A	Q	R	L	V	F	M	P	K	L	P	H	P	Q	Y	L	A	R	Y	R	H	A	D
Template Known Secondary structure										G	G	G																S	T	T								.	.		S	T	T												T	T	S		G	G	G																G	G	G		S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.			.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.												.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	Y	F	I	F	A	R	Q	Q	G	I	G	T	L	C	L	.	L	I	Q	A	G	I	P	C	V	L	N	R	E	N	P	.	.	.	.	.	F	W	Q	D	M	T	E	Q	H	L	P	V	L	F	T	T	D	D	L	N	E	.	.	.	.	.	.	.	.	.	.	.	D	I	V	R	E	A	Q	R	Q	L
Query Conservation																			.																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.									.																.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		L	F	L	D	T	H	P	.	.	Y	N	A	H	T	T	A	S	D	A	L	W	T	G	C	P	V	L	T	T	P	G	E	T	F	A	A	R	V	A	G	S	L	N	H	H	L	G	L	D	E	M	N	V	A	D	D	A	A	F	V	A	K	A	V	A	L	A	S	D	P	A	A	L	T	A	L	H	A	R	V
Template Known Secondary structure							S	S	.	.	S			S										T					B				S	S	G	G	G	S										T		G	G	G	B		S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		456	.	.	.	460	.	.			.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	D	K	N	T	I	A	F	F	S	P	N	Y	L	Q	G	W	Q	R	A	L	A	I	A	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	R	R	A	S	G	V	F	H	M	D	G	F	A	D	D	F	G	A	L	L	Q	A	L	A	R
Template Known Secondary structure								S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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