Job Description P56258 Confidence 7.20% Date Thu Jan 5 12:06:20 GMT 2012 Rank 100 Aligned Residues 41 % Identity 17% Template c2f5xC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd Resolution 1.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	G	N	S	G	D	R	S	N	E	H	I	A	A	L	R	A	V	H	Q	Q	F	G	D	T	V	K	V	V	V	P	M	G	Y	P	P	N	N	E	A	Y	I	E
Query Conservation
Alig confidence																			.														.	.	.
Template Conservation																			.														.	.	.
Template Sequence		I	S	L	A	N	A	G	I	G	A	A	S	H	L	C	G	T	.	X	L	V	E	A	L	G	V	N	L	L	T	I	.	.	.	P	Y	K	G	T	A	P	A	X	N	D
Template Known Secondary structure							S		T	T	S								.							T							.	.	.			S	S
Template Predicted Secondary structure																			.														.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions