Job Description P56258 Confidence 95.21% Date Thu Jan 5 12:06:20 GMT 2012 Rank 13 Aligned Residues 170 % Identity 14% Template c1uquB_ PDB info PDB header:synthase Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase; PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose. Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.												.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	E	G	K	M	T	I	L	V	G	N	S	G	D	R	S	N	E	H	I	A	A	L	R	A	V	H	Q	Q	F	G	D	T	.	.	.	.	.	.	V	K	V	V	V	P	M	G	Y	P	P	N	N	.	.	.	.	.	.	.	.	.	.	.	E	A	Y	I	E	E	V	R	Q	A	G	L	E	L	F	S
Query Conservation																																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W
Template Known Secondary structure		T	S	T	T												G	G	G																	G	G	G	T	T	T												T	T	S	S		T	T																			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																															.	.				.	.	.	.	.																									.
Query SS confidence																																															.	.				.	.	.	.	.																									.
Query Sequence		E	E	N	L	Q	I	L	S	E	K	L	E	F	D	A	Y	L	A	L	L	R	Q	C	D	L	G	Y	F	I	F	A	R	Q	Q	G	I	G	T	L	C	L	L	I	Q	A	.	.	G	I	P	.	.	.	.	.	C	V	L	N	R	E	N	P	F	W	Q	D	M	T	E	Q	H	L	P	V	L	F	T	T	.
Query Conservation																																															.	.				.	.	.	.	.																									.
Alig confidence									.																							.							.								.	.				.	.	.	.	.																.									.
Template Conservation									.																							.							.																																	.
Template Sequence		T	P	L	Y	Y	L	N	.	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	.	L	R	D	G	M	N	.	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	T	S	.	A	L	I	V	N	P	Y	D	R
Template Known Secondary structure			S						.	S															S							.	S	S	B	S			.										S		T	T	S								T	T	B	G	G	G	G	T		T	T	.	S					T	T
Template Predicted Secondary structure									.																							.							.																																	.
Template SS confidence
		330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.
		314	.	.	.	.	.	320	.							.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure										.	.	.	.	.	.																	.
Query SS confidence										.	.	.	.	.	.																	.
Query Sequence		D	D	L	N	E	D	I	V	.	.	.	.	.	.	R	E	A	Q	R	Q	L	A	S	V	D	K	N	T	I	A	.	F	F	S	P	N	Y	L	Q	G	W	Q	R	A	L	A
Query Conservation										.	.	.	.	.	.																	.
Alig confidence										.	.	.	.	.	.																	.
Template Conservation
Template Sequence		D	E	V	A	A	A	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	N	D	I	N	H	W	Q	E	C	F	I	S	D	L	K
Template Known Secondary structure													T																				T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions