Return to main results Retrieve Phyre Job Id

Job DescriptionP00509
Confidence100.00%DateThu Jan 5 10:56:40 GMT 2012
Rank74Aligned Residues320
% Identity16%Templated2hoxa1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50....... ..60.........70.........80.........90.........100
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Query Sequence  INLGIGVYKDETGKTPVLTSVKKAEQYLL. . . . . . . . ENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT
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Template Sequence  ADVASG. . . . . . . DGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYI. . VFG
Template Known Secondary structure 

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GGGTTS




TTTT
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   5960.... .....70.........80.........90.........100.........110.........120...... ...
 
   101........110.........120.. .......130.........140.........150.........160.........170..
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Query Sequence  PGGTGALRVAADFLAKNTSVKR. . . . . . . . VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAG
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Template Sequence  VGVTQLIHGLVISL. . SPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA. . . . . . . . . . . NYVNVSNPE
Template Known Secondary structure  S..S

TTT
TTS


SS

S

TTGG...........GGTT
S
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   130.........140... ......150.........160.........170.........180....... ..190......
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  DVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYN
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Template Sequence  QYIEMVTSPNNPEGLLRH. . . . . . . . . . AVIKGCKSIYDMVYYWPHYTP. . . . . . . . . IKYKADEDILLFTMSKFTGHSG
Template Known Secondary structure  GSS
TTT




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TT
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STS
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   197..200.........210.... .....220.........230..... ....240.........250.......
 
   253......260.........270.........280.........290.........300..... ....310.........320.......
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Query Sequence  ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRA. . . . . IWEQELTDMRQRIQRMRQLFVN
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Template Sequence  SRFGWALIKDE. . . . . . SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITA
Template Known Secondary structure  G



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TTSTTS
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   258.260........ .270.........280.........290.........300.........310.........320.........330.
 
   328.330.... .....340.........350... ......360.........370... ......380....
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Query Sequence  TLQEKGA. . . . . . . . . . . NRDFSFIIKQNGMFSFSGL. . . TKEQVLRLREEFGVYAVASG. . . . . . . . . RVNVAGMTPDN
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Template Sequence  LLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI. KTQDD
Template Known Secondary structure  TTSSS




S
TTTT



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   332.......340.........350.........360.........370.........380.........390.........400..... ....410
 
   385....390......
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Query Sequence  MAPLCEAIVAVL
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Template Sequence  FDQLMYYLKDMV
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   411........420..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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