Job Description P00509 Confidence 99.91% Date Thu Jan 5 10:56:40 GMT 2012 Rank 142 Aligned Residues 318 % Identity 13% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	.	.	.	.	.	.	.	.	.	.	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		A	Y	N	F	N	A	G	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	.	.	.	.	.	.	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S
Template Known Secondary structure							S	S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	.	.	.	.	.	.	T			S	S							S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	.	.	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H
Query Conservation																														.	.
Alig confidence												.	.																	.	.																		.	.																.	.
Template Conservation												.	.																																				.	.																.	.
Template Sequence		T	Q	F	A	M	I	P	M	N	F	.	.	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	.	.	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	.	.	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E
Template Known Secondary structure												.	.			T	T									S														S									.	.	G	G	G	T	T		S				G	G	G			.	.			T	T								S
Template Predicted Secondary structure												.	.																																				.	.																.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation										.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		T	I	E	G	A	Q	F	K	.	.	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	.	.	.	.	.	.	.	.	.	.	.	F	D	L	N	Q	F	G	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	.	.	V	T	V	V	I	V	R	E
Template Known Secondary structure		T	T	T	T				S	.	.	.	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S		.	.	.	.	.	.	.	.	.	.	.			G	G	G		S						T	T	T	T	T			S	S	.	.								G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		153	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.												.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.
		263	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																																							.	.	.
Query SS confidence												.	.	.	.	.																																							.	.	.
Query Sequence		A	D	S	E	T	V	D	R	A	F	.	.	.	.	.	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	.	.	.	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A
Query Conservation												.	.	.	.	.																																							.	.	.
Alig confidence												.	.	.	.	.																												.	.	.	.	.	.	.					.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		D	L	V	A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	.	.	.	.	.	.	.	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G
Template Known Secondary structure		G	G	S	S	S			T	T	S		G	G	G								T	T	T		S	S																.	.	.	.	.	.	.					T	T																						T	S	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.								.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.									.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.								.
Query SS confidence																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.								.
Query Sequence		N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	.	.	.	.	.	.	.	.	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	G	R	V	N	V	A	G	.	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V
Query Conservation																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.								.
Alig confidence		.	.	.																	.	.	.	.	.	.	.	.																				.	.	.	.	.	.								.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L	A	S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F
Template Known Secondary structure		.	.	.	S	S			S	S		G	G	G	B		S	S							S															T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions