Job Description P00509 Confidence 99.81% Date Thu Jan 5 10:56:40 GMT 2012 Rank 201 Aligned Residues 315 % Identity 16% Template d2a7va1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.04

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D
Query Conservation
Alig confidence																.								.	.	.	.	.	.	.													.	.	.	.											.	.
Template Conservation																.								.	.	.	.	.	.	.													.	.	.	.											.	.
Template Sequence		M	W	E	L	L	Q	R	E	K	D	R	Q	C	R	.	G	L	E	L	I	A	S	.	.	.	.	.	.	.	E	N	F	C	S	R	A	A	L	E	A	L	.	.	.	.	G	S	C	L	N	N	K	Y	S	E	.	.	G	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q
Template Known Secondary structure																.	S					T	T	.	.	.	.	.	.	.													.	.	.	.	T	S	G	G	G	T					.	.			T														T	T			T	T	T
Template Predicted Secondary structure																.								.	.	.	.	.	.	.													.	.	.	.											.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G
Query Conservation
Alig confidence						.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	G	V	N	.	V	Q	P	Y	S	G	S	P	A	N	L	A	V	Y	T	A	L	.	.	L	Q	P	H	D	R	I	M	G	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	P	K	T	G	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P	R
Template Known Secondary structure						.				S	S													.	.			S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T		S	B															S
Template Predicted Secondary structure						.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.																							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N
Query Conservation
Alig confidence		.	.														.	.	.	.	.																																									.	.	.	.	.	.											.	.
Template Conservation		.	.														.	.	.	.	.																																									.	.	.	.	.	.											.	.
Template Sequence		.	.	L	I	I	A	G	T	S	A	Y	A	R	L	I	.	.	.	.	.	D	Y	A	R	M	R	E	V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I	P	S	P	F	K	H	A	D	.	.	.	.	.	.	I	V	T	T	T	T	H	K	T	L	.	.	R	G
Template Known Secondary structure		.	.							S	S			S			.	.	.	.	.												T	T								G	G	G						T	T	S	S			G	G	G	T		S	.	.	.	.	.	.						S	S	G	G	G	.	.		S
Template Predicted Secondary structure		.	.														.	.	.	.	.																																									.	.	.	.	.	.											.	.
Template SS confidence
				204	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.			.	.
		253	.	.	.	.	.	.	260	.	.																.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	V	G	A	C	T	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N	F	.	.	.	.	.	.	A	V	F	P	S	L	Q	G	G	P	H	N	H	A	I	A	A	V	A	V	A	L	K	.	.	.	.	.	Q	A	C	T	P	M	F	R	E	Y	S	L	Q
Template Known Secondary structure			S									S						T	T	T															.	.	.	.	.	.			T	T	T	T			S															.	.	.	.	.				S
Template Predicted Secondary structure																																			.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.														370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	S	G	R	V	N	V	A
Query Conservation																																				.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		V	L	K	N	A	R	A	M	A	D	A	L	L	E	R	G	.	.	.	.	Y	S	L	V	S	G	G	T	D	N	H	L	V	L	V	D	L	R	P	K	G	L	D	G	A	R	A	E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	G	D	R	S	A	I	T	P	G	G	L	R	L	G	A	P
Template Known Secondary structure																T	T	.	.	.	.				G	G	G	S		S	S	S							T	T	T	T													T	T									T	T				S	S	S		S						S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
							379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		A	L	T	S	R	Q	F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G	V
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions