Job Description P00509 Confidence 99.83% Date Thu Jan 5 10:56:40 GMT 2012 Rank 194 Aligned Residues 340 % Identity 15% Template d1zoda1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.80

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																			.	.															.	.	.																													.	.	.	.
Template Conservation																			.	.															.	.	.																													.	.	.	.
Template Sequence		I	L	D	F	T	S	G	Q	M	S	A	V	L	G	H	C	H	.	.	P	E	I	V	S	V	I	G	E	Y	A	G	K	L	.	.	.	D	H	L	F	S	E	M	L	S	R	P	V	V	D	L	A	T	R	L	A	N	I	T	P	P	G	L	D	.	.	.	.	R	A	L	L	L	S	T	G	A	E	S	N
Template Known Secondary structure					T	T					T		T	T		B	T		.	.															.	.	.					T	T																	S		T	T			.	.	.	.						S
Template Predicted Secondary structure																			.	.															.	.	.																													.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	A	I	R	M	A	K	L	V	T	G	K	Y	E	I	V	G	F	A	Q	S	W	H	G	M	T	G	A	A	A	S	A	T	Y	S	A	G	R	K	G	V	G	P	A	A	V	G	S	F	A	I	P	A	P	F	T	Y	R	P	R	F	E	R	N	G	A	Y	D	Y	L	A	E	L	D	Y	A	F	D	L
Template Known Secondary structure													T								T	T					S	S						T			S	S			S	S	S					T	T									T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	.	.	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S
Query Conservation																							.	.
Alig confidence																							.	.																																																	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		I	D	R	Q	S	S	G	N	L	A	A	F	I	A	E	P	I	L	S	S	G	G	I	I	E	L	P	D	G	Y	M	A	A	L	K	R	K	C	E	A	R	G	M	L	L	I	L	D	E	A	Q	T	G	V	G	R	T	G	T	M	F	A	C	Q	R	D	G	V	T	P	D	.	.	.	.	.	.	I	L	T
Template Known Secondary structure								S									S			T	T	T	T						T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q
Query Conservation
Alig confidence								.																					.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation								.																					.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		L	S	K	T	L	G	.	A	G	L	P	L	A	A	I	V	T	S	A	A	I	E	E	R	A	H	E	.	.	.	.	.	L	G	Y	L	F	Y	T	T	H	V	S	D	P	L	P	A	A	V	G	L	R	V	L	D	.	.	.	.	.	.	.	.	V	V	Q	R	D	G	L	V	A	R	A	N	V	M	G	D
Template Known Secondary structure								.	T	T	S	S																	.	.	.	.	.	T	T						T	T	T	T														.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure								.																					.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.									320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.													.	.	.	.	360	.	.	.	.	.	.	.	.	.	370							.	.	.	.	.	.	.	.				.	380	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.									.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.									.	.	.
Query Sequence		L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	.	.	.	.	.	.	A	S	G	R	V	N	V	A	.	.	.	G	M	T	P
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.									.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		R	L	R	R	G	L	L	D	L	M	E	R	F	D	C	I	G	D	V	R	G	R	G	L	L	L	G	V	E	I	V	K	D	R	R	T	K	E	P	A	D	G	L	G	A	K	I	T	R	E	C	M	N	L	G	L	S	M	N	I	V	Q	L	P	G	M	G	G	V	F	R	I	A	P	P	L	T	V	S	E
Template Known Secondary structure															T	T								T	T										T	T	T	T				T	T												T	T									T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	I	D	L	G	L	S	L	L	G	Q	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions