Job Description P00509 Confidence 99.78% Date Thu Jan 5 10:56:40 GMT 2012 Rank 214 Aligned Residues 354 % Identity 13% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.																																									.
Query SS confidence																							.																																									.
Query Sequence		N	I	T	A	A	P	A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	.	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	.	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L
Query Conservation																							.																																									.
Alig confidence																							.											.	.	.	.	.																										.
Template Conservation																																		.	.	.	.	.
Template Sequence		R	L	P	E	V	D	E	L	T	L	V	R	H	Y	T	G	L	S	R	R	Q	V	G	V	D	T	T	F	Y	P	L	G	.	.	.	.	.	S	C	T	M	K	Y	N	P	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y
Template Known Secondary structure																				T	T				T	T	T	S				B	T	.	.	.	.	.	T	T															T	T	S	S			T	T	S		G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	.	.	.	.	.	.	.	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																					.	.	.	.	.	.	.																																	.	.
Template Conservation													.	.	.	.	.																																																												.	.
Template Sequence		L	K	A	L	T	G	M	D	A	I	T	.	.	.	.	.	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	.	.	G	P	E
Template Known Secondary structure							T		S				.	.	.	.	.				S	S																			T	T		T	T	T								T	T	S		T									T	T								B	.	.		T	T
Template Predicted Secondary structure													.	.	.	.	.																																																												.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M
Query Conservation
Alig confidence														.	.	.																						.	.	.																																						.	.	.	.
Template Conservation														.	.	.																						.	.	.																																						.	.	.	.
Template Sequence		G	E	V	D	L	E	A	L	K	R	E	L	.	.	.	G	P	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	.	.	.	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	P	G	D	M	G	F	D	.	.	.	.
Template Known Secondary structure		S	S	B										.	.	.	S	T	T								S	S		T	T	S				T	T	.	.	.												T							G	G	G	G	G	G	T	T	T	T							T		S	.	.	.	.
Template Predicted Secondary structure														.	.	.																						.	.	.																																						.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	.	.	.	.	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A
Query Conservation																			.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.												.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		.	.	.	.	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	.	.	.	.	.	.	.	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L
Template Known Secondary structure		.	.	.	.						T	T	T	T	T					T	T	S											G	.	.	.	.	.	.	.	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
						259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A
Query Conservation																																																														.	.
Alig confidence										.	.	.	.	.																																				.												.	.
Template Conservation										.	.	.	.	.																																				.
Template Sequence		V	R	A	W	A	Y	I	R	.	.	.	.	.	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	.	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P
Template Known Secondary structure										.	.	.	.	.																												T	T		B		S	S		.	S	S			S					B		S	T	T													T	T
Template Predicted Secondary structure										.	.	.	.	.																																				.
Template SS confidence
		328	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		370	.	.	.										.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.					.
Query SS confidence						.	.	.	.	.	.	.	.	.					.
Query Sequence		V	A	S	G	.	.	.	.	.	.	.	.	.	R	V	N	V	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation						.	.	.	.	.	.	.	.	.					.
Alig confidence						.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		P	T	V	Y	F	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L
Template Known Secondary structure					S		S	T	T	S	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.