Job Description P00509 Confidence 99.89% Date Thu Jan 5 10:56:40 GMT 2012 Rank 161 Aligned Residues 323 % Identity 15% Template d1w23a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.08

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	.	.	.	.	.	.	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																		.	.
Template Conservation																																																														.	.
Template Sequence		V	F	N	F	N	A	G	P	S	A	L	P	K	P	A	L	E	R	A	Q	K	E	L	L	N	F	N	D	T	Q	M	S	V	M	E	L	S	H	R	S	Q	S	Y	E	E	V	H	E	Q	A	Q	N	L	L	R	E	L	L	Q	I	.	.	P	N	D	Y	Q	I	L	F	L	Q	G	G	A	S	L	Q	F	T
Template Known Secondary structure							S	S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																			T		.	.		T	T							S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D
Query Conservation
Alig confidence								.	.																																																			.	.
Template Conservation								.	.																																																			.	.
Template Sequence		M	L	P	M	N	L	.	.	L	T	K	G	T	I	G	N	Y	V	L	T	G	S	W	S	E	K	A	L	K	E	A	K	L	L	G	E	T	H	I	A	A	S	T	K	A	N	S	Y	Q	S	I	P	D	F	S	E	F	Q	.	.	L	N	E	N	D	A	Y	L	H	I	T	S	N	N	T	I	Y	G	T	Q
Template Known Secondary structure								.	.			T	T									S												T	T	S									G	G	G	T	S		S				G	G	G			.	.			T	T								S			T	T	T	T
Template Predicted Secondary structure								.	.																																																			.	.
Template SS confidence
		82	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation				.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		Y	Q	.	.	.	.	.	.	.	.	N	F	P	E	I	N	H	A	P	L	I	A	D	M	S	S	D	I	L	S	R	P	.	.	.	.	.	.	.	.	.	.	.	L	K	V	N	Q	F	G	M	I	Y	A	G	A	Q	K	N	L	G	P	S	G	.	.	V	T	V	V	I	V	K	K	D	L	L	N	T	K
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	S						S	S							T	T	T	T	T	S	S		.	.	.	.	.	.	.	.	.	.	.			G	G	G		S						T	T	T	T	T	S		T	T	.	.													S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		158	.									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.
		269	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure						.	.	.	.	.																																							.	.	.
Query SS confidence						.	.	.	.	.																																							.	.	.
Query Sequence		D	R	A	F	.	.	.	.	.	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	.	.	.	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F
Query Conservation						.	.	.	.	.																																							.	.	.
Alig confidence						.	.	.	.	.																												.	.	.	.	.	.	.					.	.	.																									.	.	.
Template Conservation																																						.	.	.	.	.	.	.																																.	.	.
Template Sequence		V	E	Q	V	P	T	M	L	Q	Y	A	T	H	I	K	S	D	S	L	Y	N	T	P	P	T	F	S	I	Y	M	L	R	N	V	L	D	.	.	.	.	.	.	.	W	I	K	D	L	G	G	A	E	A	I	A	K	Q	N	E	E	K	A	K	I	I	Y	D	T	I	D	E	S	N	G	.	.	.	F	Y	V
Template Known Secondary structure			T	T			G	G	G								T	T	T		S	S																.	.	.	.	.	.	.					T	T																						T	T	T	T	.	.	.	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																																.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.
		341	.	.	.	.	.	.								.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.								.																			.	.	.	.	.	.								.
Query SS confidence									.	.	.	.	.	.	.								.																			.	.	.	.	.	.								.
Query Sequence		I	I	K	Q	N	G	M	.	.	.	.	.	.	.	F	S	F	S	G	L	T	.	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	G	R	V	N	V	A	G	.	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A
Query Conservation									.	.	.	.	.	.	.								.																			.	.	.	.	.	.								.
Alig confidence									.	.	.	.	.	.	.								.																			.	.	.	.	.	.								.
Template Conservation
Template Sequence		G	H	A	E	K	G	S	R	S	L	M	N	V	T	F	N	L	R	N	E	E	L	N	Q	Q	F	L	A	K	A	K	E	Q	G	F	V	G	L	N	G	H	R	S	V	G	G	C	R	A	S	I	Y	N	A	V	P	I	D	A	C	I	A	L	R	E	L	M	I	Q
Template Known Secondary structure			S	S		G	G	G	B		S	S							S	S														T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions