 |
Job Description | P00509 | Confidence | 20.55% | Date | Thu Jan 5 10:56:40 GMT 2012 |
Rank | 412 | Aligned Residues | 114 |
% Identity | 11% | Template | d1ve1a1 |
SCOP info | Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
|
Resolution | 1.45 |
|
 |
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | L | G | I | D | G | I | P | E | F | G | R | C | T | Q | E | L | L | . |
F | G | K | G | S | A | L | I | N | D | K | R | A | R | T | A | Q | T | P | G | G | T | G | A | L | R | V | A | A | D | F | L | A | K | N | T | S | V | K | R | V | W | V | S | N | P | S | W | P | N | H | K | S | V | F | N | S | A | G | L |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|
|   | . |   |
|   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
E | G | L | N | P | G | G | S | I | K | D | R | P | A | W | Y | M | I | K | D | A | E | E | R | G | I | L | R | P | G | S | G | Q | V | I | V | E | P | T | S | G | N | T | G | I | G | L | A | M | . |
I | A | A | S | R | G | Y | R | L | I | L | T | M | P | A | Q | M | S | E | E | R | K | R | V | L | K | A | F | G | A |
Template Known Secondary structure |   |
G | G | G | S | T | T | S | B | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| T | T | S |
|
|  |  |  |  | S |
|
| S |  |  |  |  |  |  |  |  | . |  |  |  |  |  | T |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | R | E | Y | A | Y | Y | D | A | E | N | H | T | L | D | F | D | A | L | I | N | S | L | N | E | A | Q | A | G | D | V | V | L | F | H | G | C | C | H | N | P |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | L | V | L | T | D | P | . |
. |
. |
. |
. |
. |
E | R | R | M | L | A | A | R | E | E | A | L | R | L | K | E | E | L | G | A | F | M | P | D | Q | F | K | N | P |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| B |
|
|
| T | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|