Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 82 Aligned Residues 365 % Identity 12% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		N	I	T	A	A	P	A	D	P	I	L	G	L	A	D	L	F	R	.	.	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L
Query Conservation																				.	.
Alig confidence																				.	.																																											.
Template Conservation																																																																.
Template Sequence		R	I	K	S	V	E	T	V	S	M	I	P	R	D	E	R	L	K	K	M	Q	E	A	G	Y	N	T	F	L	L	N	S	K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	M	G	D	E	A	.	Y	A	G	S	E	N	F	Y	H	L	E	R	T	V	Q	E	L
Template Known Secondary structure																								T	T	T		G	G	G	S		G	G	G		S				S		S	S	S													T	T					.	S	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																			.	.																																		.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																			.	.																																		.	.
Template Sequence		F	G	F	K	H	.	.	.	.	.	.	.	.	.	.	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	.	.	I	K	P	G	Q	Y	V	A	G	N	M	Y	K	N	G	A	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	.	.	A	F	K	G	D	I	D	L	K	K
Template Known Secondary structure					S		.	.	.	.	.	.	.	.	.	.					S	S													.	.			T	T						S					S	S						B		T	T	S	S		S	S				.	.	T	T	T	T		B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																			.	.																																		.	.
Template SS confidence
		88	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.
		162	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure											.																.																																			.	.	.	.	.	.
Query SS confidence											.																.																																			.	.	.	.	.	.
Query Sequence		L	I	N	S	L	N	E	A	Q	.	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	.	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	.	.	.	.	.	.	G	L	E	E	D	A	E	G	L	R	A	F	A	A
Query Conservation											.																.																																			.	.	.	.	.	.
Alig confidence											.																.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	K	L	I	D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	R	E	L	T	A	A	H	G	I	K	V	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A	E	I	V	H
Template Known Secondary structure											G	G	G								S	S	B		S	T	T		B																	T	T								T	T												S	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D
Query Conservation
Alig confidence																																																.																				.	.	.	.	.	.	.	.
Template Conservation																																																.																				.	.	.	.	.	.	.	.
Template Sequence		E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	D	E	M	F	S	S	A	K	E	L	V	V	V	Y	E	G	M	.	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	.	.	.	.	.	.	.	.	E	A	M	Q	Y	E
Template Known Secondary structure						T	S	S						T	T	T	T	T			S	S																								S	S	.			S	S	S															.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																.																				.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.														.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	R
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																						.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	K	A	A	G	.	.	.	.	V	P	I	V	E	P	V	G	G	H	A	V	F	L	D	A	R	R	F	C	E	H	L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	R	G	I	K	L	E	T	V	R
Template Known Secondary structure																			T	T	T	.	.	.	.			B		S	S			S	S										T	T	T	S		G	G	G															S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		375	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		V	N	V	A	G	.	.	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K	L	Y
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions