Job Description P00509 Confidence 99.90% Date Thu Jan 5 10:56:40 GMT 2012 Rank 150 Aligned Residues 332 % Identity 14% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	.	.	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D
Query Conservation																														.	.
Alig confidence																														.	.																												.						.	.
Template Conservation																																																											.						.	.
Template Sequence		V	Y	L	D	N	A	A	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	.	S	P	R	E	I	.	.	V	Y	T	R	N	A	T	E	A	I	N	L	V	A	Y
Template Known Secondary structure					B	T	T	T																			T							S																					T	T		S	.		G	G	G		.	.				S	S
Template Predicted Secondary structure																																																											.						.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		113	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure						.	.																									.	.	.	.
Query SS confidence						.	.																									.	.	.	.
Query Sequence		F	L	A	K	.	.	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	.	.	.	.	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G
Query Conservation						.	.																									.	.	.	.
Alig confidence						.	.																									.	.	.	.										.	.																.	.	.
Template Conservation																																													.	.																.	.	.
Template Sequence		S	W	G	M	N	N	L	K	A	G	D	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	L	.	.	D	E	Q	E	S	F	D	L	E	H	F	K	T	L	L	.	.	.	S	E	K	T	K	L	V	T	V	V	H	I	S	N	T	L	G
Template Known Secondary structure			T							T	T							T	T			G	G	G	T																			B	.	.		T	T	S	S	B										.	.	.		T	T								S	B		T	T	T
Template Predicted Secondary structure																																													.	.																.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E
Query Conservation
Alig confidence											.	.	.																									.	.	.	.	.	.	.	.	.																						.	.
Template Conservation											.	.	.																									.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		C	V	N	P	A	E	E	I	A	.	.	.	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	A	P	H	Y	P	L	D	.	.	.	.	.	.	.	.	.	V	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	A	P	T	G	.	.	I	G	F	L	Y	G	K	E	E	I	L	E
Template Known Secondary structure		B	B								.	.	.						T	T								T	T	T	T	T	T	S				.	.	.	.	.	.	.	.	.					T		S						G	G	G	T	T	S		T	T	.	.
Template Predicted Secondary structure											.	.	.																									.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.															.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	D	R	A	F	S	Q	M	K	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		A	M	P	P	F	F	G	G	G	E	M	I	A	E	V	F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	.	.	.	.	.	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T	H	Y	L	W	Q	G	L	G	Q	I
Template Known Secondary structure			S				S		S	T	T	S						S	S							T	T	G	G	G			S	S																		.	.	.	.	.																								T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.						.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.																	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence															.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		G	A	N	R	D	F	S	F	I	I	K	Q	N	.	.	.	.	.	G	M	F	S	F	S	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	N	V	A	.	G	M	T	P	D	N	M	A	P
Query Conservation															.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence		.	.	.											.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	Q	L	R	L	Y	G	P	N	P	K	H	G	D	R	A	A	L	A	S	F	N	V	A	G	L	H	A	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	H	R	L	F	D	A	S	G	S	A	R	A	S	L	Y	F	Y	N	T	K	E	E	I	D	L
Template Known Secondary structure		.	.	.	T	T					S			G	G	G	S		B		S							T	T	B											T	T	T				B		S		T	T								T	T											T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		388	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	Q	S	L	Q	A	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions