Job Description P00509 Confidence 99.88% Date Thu Jan 5 10:56:40 GMT 2012 Rank 169 Aligned Residues 343 % Identity 12% Template d1s0aa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.71

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R
Query Conservation
Alig confidence																	.	.															.	.																															.	.	.	.
Template Conservation																	.	.															.	.																															.	.	.	.
Template Sequence		V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	.	.	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	.	.	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	.	.	.	.	C	V	F	L	A	D	S	G	S	V	A	V	E
Template Known Secondary structure				S	S	T	T	T	T	T		T	T		B	S	.	.															.	.		S					S	S																	S		T	T			.	.	.	.						S	S
Template Predicted Secondary structure																	.	.															.	.																															.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.															.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Query SS confidence											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Query Sequence		V	A	A	D	F	L	A	K	N	.	.	.	.	.	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	R	E	Y	A	Y	.	.	.	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L
Query Conservation											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Alig confidence											.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation
Template Sequence		V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M
Template Known Secondary structure															T										T	T					S	S					T	T	S		T	T	T	T	T	G	G	G	G	T	T	T	S											S	B						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	.	.	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y
Query Conservation																						.	.
Alig confidence																						.	.																																					.	.	.															.	.	.
Template Conservation																																																												.	.	.															.	.	.
Template Sequence		A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	.	.	.	L	F	A	C	E	H	A	E	I	A	P	D	I	L	.	.	.	C	L
Template Known Secondary structure					T	T	T								S	S				T	T	T				B		T														T								T	T	T	T	T	T	T	T	S	S	.	.	.	S	S	G	G	G	G	G	T				S			.	.	.
Template Predicted Secondary structure																																																												.	.	.															.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L
Query Conservation
Alig confidence							.																								.	.																									.	.	.	.	.	.	.	.
Template Conservation							.																								.	.																									.	.	.	.	.	.	.	.
Template Sequence		G	A	L	T	G	.	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	.	.	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	.	.	.	.	.	.	.	.	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q
Template Known Secondary structure				T	T	S	.	S	S	S																	T	S	T	T	.	.	S	S		S				T	T	T	T														.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure							.																								.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.									.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.				.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																					.								.	.	.
Query SS confidence																													.	.	.																					.								.	.	.
Query Sequence		F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	.	S	G	R	V	N	V	A	.	.	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																													.	.	.																					.								.	.	.
Alig confidence																													.	.	.																					.								.	.	.
Template Conservation
Template Sequence		L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V
Template Known Secondary structure							G	G	G	G	G		T	T								T	T							S	S		B												T	T						B	T	T								T	T																	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions