Job Description P00509 Confidence 99.90% Date Thu Jan 5 10:56:40 GMT 2012 Rank 154 Aligned Residues 306 % Identity 11% Template d1o69a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.84

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	.	.	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W
Query Conservation																										.	.
Alig confidence											.	.	.	.	.	.	.	.								.	.																	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation											.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		K	Y	I	E	E	V	F	K	S	.	.	.	.	.	.	.	.	N	Y	I	A	P	L	G	E	F	V	N	R	F	E	Q	S	V	K	D	Y	S	K	S	E	N	.	.	.	.	.	.	.	.	.	.	A	L	A	L	N	S	A	T	A	A	L	H	L	A	L	R	V	A	G	.	V	K	Q	D	D	I	V	L
Template Known Secondary structure											.	.	.	.	.	.	.	.	T	T	T	S		T	T																	S		.	.	.	.	.	.	.	.	.	.					S													T	T	.			T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		16	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.											50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K
Query Conservation
Alig confidence																											.	.																												.	.	.										.	.	.
Template Conservation																											.	.																												.	.	.										.	.	.
Template Sequence		A	S	S	F	T	F	I	A	S	V	A	P	I	C	Y	L	K	A	K	P	V	F	I	D	C	.	.	D	E	T	Y	N	I	D	V	D	L	L	K	L	A	I	K	E	C	E	K	K	P	K	A	L	I	L	.	.	.	T	H	L	Y	G	N	A	A	K	.	.	.	M	D	E	I	V	E	I	C	K	E	N
Template Known Secondary structure				S	S	S		G	G	G	T						T	T								B	.	.		T	T	S	S	B													S	S								.	.	.			G	G	G					.	.	.											T
Template Predicted Secondary structure																											.	.																												.	.	.										.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																										.	.	.	.	.	.																.																															.	.	.	.
Template Conservation																										.	.	.	.	.	.																.
Template Sequence		D	I	V	L	I	E	D	A	A	E	A	L	G	S	F	Y	K	N	K	A	L	G	T	F	.	.	.	.	.	.	G	E	F	G	V	Y	S	Y	N	G	N	K	I	I	T	.	T	S	G	G	G	M	L	I	G	K	N	K	E	K	I	E	K	A	R	F	Y	S	T	Q	A	R	E	N	C	L	H	Y	E	H
Template Known Secondary structure		T								T	T		T	T				T	T			T	T	S	S	.	.	.	.	.	.	S	S								T	T	S	S	S		.		S	S							S												T	B	T				S	S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.																.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
					281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																					.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	Y	G	Y	N	Y	R	L	S	N	V	L	G	A	I	G	V	A	Q	M	E	V	.	.	.	.	.	.	.	.	.	.	L	E	Q	R	V	L	K	K	R	E	I	Y	E	W	Y	K	E	F	L	G	E	Y	F	S	F	L	D	E	L	E	N	S	R	S	N	R	W	L	S	T	A	L	I	N	F	D	K
Template Known Secondary structure		S	S				B		B														T	T	.	.	.	.	.	.	.	.	.	.																				T	T	T								T	T						S	S						S			G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.																													.	.	.	.	.		.	.	380	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	N	V	.	A	G	M	T	P	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		N	E	L	N	A	C	Q	K	D	I	N	I	S	Q	K	N	I	T	L	H	P	K	I	S	K	L	I	E	D	L	K	N	K	Q	I	E	T	R	P	L	W	K	A	M	H	T	Q	E	V	F	K	G	A	K	A	Y	L	N	G	N	S	E	L	F	F	Q	K	G	I	C	L	P	S	G	T	A	M	S	K	D
Template Known Secondary structure		G	G	S																														T	T				B						G	G	G		G	G	G	T	T							S																T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		384	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	Y	E	I	S	K	L	I	L	K	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions