Job Description P00509 Confidence 99.92% Date Thu Jan 5 10:56:40 GMT 2012 Rank 137 Aligned Residues 325 % Identity 16% Template d1jf9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.00

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	.	.	.	.	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																																.						.	.
Template Conservation																																																													.						.	.
Template Sequence		A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	.	S	A	E	E	L	.	.	V	F	V	R	G	T	T	E	G	I	N	L	V
Template Known Secondary structure						T	T	T																			T					S	S		S	S																					T	T		S	.		G	G	G		.	.				S	S
Template Predicted Secondary structure																																																													.						.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.
		111	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure						.	.																											.	.	.	.
Query SS confidence						.	.																											.	.	.	.
Query Sequence		A	D	F	L	.	.	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	.	.	.	.	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P
Query Conservation						.	.																											.	.	.	.
Alig confidence						.	.																											.	.	.	.										.	.																.	.	.
Template Conservation																																															.	.																.	.	.
Template Sequence		A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	.	.	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	.	.	.	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V
Template Known Secondary structure												T	T							T	T			G	G	G	T											T								B	.	.		T	T	S		B		G	G	G						.	.	.		T	T								S	B		T	T
Template Predicted Secondary structure																																															.	.																.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D
Query Conservation
Alig confidence											.	.	.																											.	.	.	.	.	.	.	.	.																			.	.												.	.
Template Conservation											.	.	.																											.	.	.	.	.	.	.	.	.																			.	.												.	.
Template Sequence		L	G	T	E	N	P	L	A	E	.	.	.	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	.	.	.	.	.	.	.	.	.	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	.	.	P	T	G	I	G	I	L	Y	V	K	E	.	.
Template Known Secondary structure		T			B						.	.	.								T	T								T	T	T	T	T	T	S				.	.	.	.	.	.	.	.	.					T		S						G	G	G	T	T	S	.	.		S	S									.	.
Template Predicted Secondary structure											.	.	.																											.	.	.	.	.	.	.	.	.																			.	.												.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240
		265	.	.	.	.	270	.	.	.	.	.																							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	T	V	D	R	A	F	S	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation		.	.	.	.	.																																																								.	.	.	.	.
Template Sequence		.	.	.	.	.	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	.	.	.	.	.	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M
Template Known Secondary structure		.	.	.	.	.				T	T				S	S		S	S	S	S						T	T	T							T	T	G	G	G			S	S																		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																								.	.	.	.	.
Template SS confidence
							241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.																	.	.	.	.	.		.	.	380	.
Predicted Secondary structure																															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	N	V	.	A	G	M	T
Query Conservation																															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence														.	.	.															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation														.	.	.
Template Sequence		H	Y	A	L	S	Q	L	E	S	V	P	D	.	.	.	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T
Template Known Secondary structure									T	T	S	T	T	.	.	.					S		T	T			S							T	T													T	T								T	T								T	T		S									T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions