Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 20 Aligned Residues 364 % Identity 17% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	R	.	.	.	.	.	.	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	.	.	.	.	.	.	N	Y	L	G	I	D	G	I	P	E	F	G	R	C
Query Conservation																		.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.											.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		E	S	P	Y	F	D	G	W	K	A	Y	D	S	D	P	F	H	P	L	K	N	P	N	G	V	I	Q	M	G	L	A	E	.	.	.	.	.	.	N	Q	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A
Template Known Secondary structure					T	T									S	B			S	S	S	S	T	T	S	B				S	S			.	.	.	.	.	.			S	S												T	T	S	S	T	T												T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	.	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T
Query Conservation																																																																		.
Alig confidence																																							.	.																										.
Template Conservation																																							.	.
Template Sequence		I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A	G	G	A	T	G	A	N	E	T	I	I	F	C	L	.	.	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K
Template Known Secondary structure										T	T	T		S				T	T	S																			.	.			T	T							S	S			T	T					T	T	T	T	T											T	T	T	T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		L	D	F	D	A	L	I	N	S	L	N	.	.	.	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I	K	V	K	G	L	I	L	T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E
Template Known Secondary structure																	T	T										S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		234							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		M	.	.	.	.	.	.	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																																								.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S	K	D	M	G	L	P	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	.	.	.	.	.	.	.	.	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	.	.	.	K	F	V
Template Known Secondary structure		G	G	G	T	T	S		T	T	S							S	T	T	T	S	S		G	G	G								S													.	.	.	.	.	.	.	.	T	T	S														T	T			.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.												.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	.	.	.	.	.	.	.	.	.	.	.	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																												.	.	.	.
Template Sequence		D	N	F	L	R	E	S	A	M	R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	V	G	.	.	.	.	I	K	C	L	K	N	N	A	G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E
Template Known Secondary structure																										T	T	.	.	.	.			B				S	S	S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
									374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	Q	E	P	G	W	F	R	V	C	F	A	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R	F	V
Template Known Secondary structure			S	S	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions