Job Description P00509 Confidence 99.93% Date Thu Jan 5 10:56:40 GMT 2012 Rank 122 Aligned Residues 352 % Identity 16% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	A	A	P	A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F
Query Conservation
Alig confidence												.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.											.	.
Template Conservation												.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.											.	.
Template Sequence		K	L	L	V	T	P	P	K	A	L	.	.	.	.	.	.	L	K	P	L	S	I	P	N	Q	L	L	L	G	P	G	.	.	.	.	.	.	.	P	S	N	L	P	P	R	I	M	A	A	G	.	.	.	.	G	L	Q	M	I	G	S	M	S	K	.	.	D	M	Y	Q	I	M	D	E	I	K	E	G	I	Q
Template Known Secondary structure				S	S				G	G	G	.	.	.	.	.	.	G	S											S	S	S	.	.	.	.	.	.	.													.	.	.	.	T						T	T	S		.	.
Template Predicted Secondary structure												.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.											.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I
Query Conservation
Alig confidence								.	.	.																							.	.																																		.	.
Template Conservation								.	.	.																							.	.																																		.	.
Template Sequence		Y	V	F	Q	T	R	.	.	.	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V	N	V	.	.	L	E	P	G	D	S	F	L	V	G	A	N	G	I	W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	.	.	D	P	G	G	H	Y	T	L	Q	E	V	E
Template Known Secondary structure					T			.	.	.		S						S	S														.	.			S	S							B	S	S																B			B		.	.		T	T
Template Predicted Secondary structure								.	.	.																							.	.																																		.	.
Template SS confidence
		66	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence											.	.																	.	.	.																																													.	.	.	.	.	.
Template Conservation											.	.																	.	.	.
Template Sequence		E	G	L	A	Q	H	K	P	V	.	.	L	L	F	L	T	H	G	E	S	S	T	G	V	L	Q	P	.	.	.	L	D	G	F	G	E	L	C	H	R	Y	K	C	L	L	L	V	D	S	V	A	S	L	G	G	T	P	L	Y	M	D	R	Q	G	I	D	I	L	Y	S	G	S	Q	K	A	L	N	A	P	P
Template Known Secondary structure										S	.	.						S			T	T	T	T					.	.	.		T	T							T	T	T								T	T	T	T	T	T	S				T	T	T	T	T		S						S	S	S	T	T				T
Template Predicted Secondary structure											.	.																	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
							238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																											.	.	.	.	.																																.	.	.	.	.
Template Conservation																																	.	.	.	.	.																																.	.	.	.	.
Template Sequence		G	T	S	L	I	S	F	S	D	K	A	K	K	K	M	Y	S	R	K	T	K	P	F	S	F	Y	L	D	I	K	W	.	.	.	.	.	L	A	N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	.	.	.	.	.	L	I	A	E	Q	G	L	E
Template Known Secondary structure		T															T	T		S	S			S		S	T	T					.	.	.	.	.					T	T		S	S	S						S																.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.						.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Query SS confidence																																													.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Query Sequence		D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	.	.	.	.	.	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N	V	.	.
Query Conservation																																													.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Alig confidence																																													.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Template Conservation
Template Sequence		N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	G	L	Q	L	F	V	K	D	P	A	L	R	L	P	T	V	T	T	V	A	V	P	A	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	S	T	G	K	V	L	R	I	G	L	L	G
Template Known Secondary structure																						T			B	S	S		S	G	G	G	B		T	T								T	T																							G	G	G	T	T	T								G
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	N	A	T	R	E	N	V	D	R	V	T	E	A	L	R	A	A	L
Template Known Secondary structure		G	G		S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions