Job Description P00509 Confidence 99.95% Date Thu Jan 5 10:56:40 GMT 2012 Rank 97 Aligned Residues 328 % Identity 17% Template d1dfoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	.	.	.	.	.	.	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P
Query Conservation																																.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.																																																										.	.	.	.	.
Template Sequence		H	I	E	L	I	A	S	.	.	.	.	.	.	.	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	.	.	.	.	.	V	Q	P	H
Template Known Secondary structure		S					T	T	.	.	.	.	.	.	.													T	S	G	G	G	G							T	T			S	S	S																					T		S				.	.	.	.	.				S
Template Predicted Secondary structure									.	.	.	.	.	.	.																																																										.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	.	.	.	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H
Query Conservation																																			.	.	.
Alig confidence															.	.																			.	.	.																																							.	.
Template Conservation															.	.																																																												.	.
Template Sequence		S	G	S	Q	A	N	F	A	V	Y	T	A	L	.	.	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	.	.	M	I	I	G
Template Known Secondary structure		S													.	.			T	T								T	T	T	T			G	G	G	T		T	T	S						S							B		S	S	S	S	B															S	.	.
Template Predicted Secondary structure															.	.																																																												.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C
Query Conservation
Alig confidence				.	.									.	.	.																																								.	.	.	.	.	.											.	.
Template Conservation				.	.									.	.	.																																								.	.	.	.	.	.											.	.
Template Sequence		G	F	.	.	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	.	.	.	.	.	.	V	V	T	T	T	T	H	K	T	L	.	.	A	G	P	R	G	G	L	I
Template Known Secondary structure				.	.	S	S			S				.	.	.											T	T								T	T	T							T	S	S				T	T	T	S	S	.	.	.	.	.	.						S	S	S	T	T	.	.				S
Template Predicted Secondary structure				.	.									.	.	.																																								.	.	.	.	.	.											.	.
Template SS confidence
		173	.			.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F
Query Conservation
Alig confidence																.	.	.																									.	.	.	.	.																														.	.	.	.
Template Conservation																.	.	.																									.	.	.	.	.																														.	.	.	.
Template Sequence		L	A	K	G	G	S	E	E	L	Y	K	K	L	N	.	.	.	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	.	.	.	.	.	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	.	.	.	.	Y
Template Known Secondary structure				S	S											.	.	.				T	T	T	T		S	S															.	.	.	.	.		T	T	S																								T	T	.	.	.	.
Template Predicted Secondary structure																.	.	.																									.	.	.	.	.																														.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.
		339	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.															.	.	.	.	.						.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Query Sequence		S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	A	.	.	.	.	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V
Query Conservation															.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Alig confidence															.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Template Conservation
Template Sequence		K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C
Template Known Secondary structure				G	G	G	S		S	S	S							G	G	G	T													T	T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		394	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions