Job Description P00509 Confidence 99.85% Date Thu Jan 5 10:56:40 GMT 2012 Rank 184 Aligned Residues 287 % Identity 16% Template c3qi6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99 Resolution 1.91 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E
Query Conservation
Alig confidence																												.	.	.	.	.	.																				.	.
Template Conservation																												.	.	.	.	.	.																				.	.
Template Sequence		G	Y	E	Y	A	R	T	G	N	P	T	R	T	A	L	E	A	A	L	A	A	V	E	D	A	A	.	.	.	.	.	.	F	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	.	.	L	R	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G
Template Known Secondary structure		T	B		B	T	T	T																T	T		S	.	.	.	.	.	.						S	S													.	.			T	T							T	T												T	G	G	G
Template Predicted Secondary structure																												.	.	.	.	.	.																				.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E
Query Conservation
Alig confidence											.	.	.												.	.	.																						.	.	.
Template Conservation											.	.	.												.	.	.																						.	.	.
Template Sequence		W	N	V	E	Y	T	P	V	A	.	.	.	L	A	D	L	D	A	V	R	A	A	I	.	.	.	R	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	.	.	.	I	A	G	I	A	Q	L	G	A	D	S	S	A	K	V	L	V	D	N	T	F	A	S	P	A	L	Q	Q	P	L
Template Known Secondary structure		G	T								.	.	.	T	T										.	.	.		T	T								S	S		T	T	T						.	.	.											T	T								T	T	T		T	T	T			G	G
Template Predicted Secondary structure											.	.	.												.	.	.																						.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																																.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																																.	.	.
Template Sequence		S	L	.	.	.	.	.	.	.	.	.	.	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	.	.	.	.	.	.	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K	T	.	.	.
Template Known Secondary structure		G	G	.	.	.	.	.	.	.	.	.	.	T		S										S		S	S										S			.	.	.	.	.	.																														T	T	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.																																.	.	.
Template SS confidence
		196	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.																	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.				.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	.	.	.	E
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	V	L	R	M	Q	R	H	S	E	N	A	A	A	V	A	E	F	L	A	E	H	P	A	I	S	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	G	R	T	A	A	E	Q	L	C	A	K	T	N	I
Template Known Secondary structure		.	.	.	.	.	.	.																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T													S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		365	.	.	.	.	370	.	.																								.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	V	Y	A	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																								.	.	.
Template Sequence		F	I	L	A	E	S	L	G	S	V	E	S	L	I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S	V	G	I	.	.	.	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure		S				S					S	S						T	T	T					S					T	T								S	.	.	.	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions