Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 60 Aligned Residues 354 % Identity 15% Template c3pdxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine aminotransferase; PDBTitle: crystal structural of mouse tyrosine aminotransferase Resolution 2.91 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T
Query Conservation
Alig confidence																		.																																																	.										.	.
Template Conservation																		.																																																	.										.	.
Template Sequence		K	P	N	P	N	K	T	V	I	S	L	S	I	G	D	P	.	T	V	F	G	N	L	P	T	D	P	E	V	T	Q	A	M	K	D	A	L	D	S	G	K	Y	N	G	Y	A	P	S	I	G	Y	L	S	S	R	E	E	V	A	S	Y	Y	H	C	P	.	E	A	P	L	E	A	K	D	V	.	.	I	L	T
Template Known Secondary structure					T	T	S						S				T	.	T	S	S	S	S	S																T	T		S	S	S				T	T													T			S	.	S	S				G	G	G		.	.
Template Predicted Secondary structure																		.																																																	.										.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.			.	140	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C
Query Conservation
Alig confidence																.	.																																																			.	.	.
Template Conservation																.	.																																																			.	.	.
Template Sequence		S	G	C	S	Q	A	I	E	L	C	L	A	V	L	.	.	A	N	P	G	Q	N	I	L	I	P	R	P	G	F	S	L	Y	R	T	L	A	E	S	M	G	I	E	V	K	L	Y	N	L	L	P	E	K	S	W	E	I	D	L	K	Q	L	E	S	L	I	.	.	.	D	E	K	T	A	C	L	V	V	N	N
Template Known Secondary structure		S	S											T	T	.	.			S	S							S	S													T										G	G	G	T	T									T	T		.	.	.		S	S								S
Template Predicted Secondary structure																.	.																																																			.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		P	S	N	P	C	G	S	V	F	S	K	R	H	L	Q	K	I	L	A	V	A	E	R	Q	C	V	P	I	L	A	D	E	I	Y	G	D	M	V	F	S	D	C	K	Y	E	P	.	.	.	M	A	T	L	S	T	N	V	P	I	L	S	C	G	G	L	A	R	W	L	V	P	G	W	R	L	G	W	I	L	I
Template Known Secondary structure		S		T	T	T																	T	T	T	T								T	T	T	T		B		S	S	S					.	.	.	G	G	G	G		S	S								B					S		G	G	G
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F
Query Conservation
Alig confidence																					.																				.	.	.	.	.																															.	.	.
Template Conservation																					.																				.	.	.	.	.																															.	.	.
Template Sequence		H	D	R	R	D	I	F	G	N	E	I	R	D	G	L	V	K	L	S	.	Q	R	I	L	G	P	C	T	I	V	Q	G	A	L	K	S	I	L	Q	.	.	.	.	.	R	T	P	Q	E	F	Y	Q	D	T	L	S	F	L	K	S	N	A	D	L	C	Y	G	A	L	S	A	I	P	G	.	.	.	L	Q	P
Template Known Secondary structure				S	S	S	S	S													.	T	T	T			S														.	.	.	.	.																												S	T	T	.	.	.	B
Template Predicted Secondary structure																					.																				.	.	.	.	.																															.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.						.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.											.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		I	I	K	Q	N	G	M	F	S	F	S	G	L	.	.	.	.	.	.	.	.	.	.	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation															.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.						.
Template Conservation																																																										.
Template Sequence		V	R	P	S	G	A	M	Y	L	M	V	G	I	E	M	E	H	F	P	E	F	E	N	D	V	E	F	T	E	R	L	I	A	E	Q	S	V	H	C	L	P	A	T	C	F	E	Y	P	N	F	F	R	V	V	I	T	.	V	P	E	V	M	M	L	E	A	C	S	R	I	Q	E	F	C
Template Known Secondary structure		B				B	T	T						B		T	T	S			S		S	S																			G	G	G	G	T			S						S		.	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions