Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 67 Aligned Residues 346 % Identity 20% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		E	N	I	T	A	A	P	A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	.	.	.	.	.	.	.	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																						.	.	.	.	.								.	.	.	.	.	.	.																		.
Template Conservation							.	.	.	.	.	.																						.	.	.	.	.																																.
Template Sequence		X	K	L	P	R	.	.	.	.	.	.	F	G	V	E	E	W	L	N	V	H	E	N	S	A	I	Y	D	I	A	G	V	.	.	.	.	.	S	I	S	S	L	T	L	E	E	L	F	A	L	S	G	T	N	P	E	D	F	Y	K	K	L	Q	G	T	K	L	N	.	Y	G	W	I	E	G	S	P	A	F	K
Template Known Secondary structure			S	S			.	.	.	.	.	.											G	G	G		S							.	.	.	.	.	S														T												T	S			S	.	S			T	T
Template Predicted Secondary structure							.	.	.	.	.	.																						.	.	.	.	.																																.
Template SS confidence
		1	.	.	.	.							.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H
Query Conservation
Alig confidence											.	.	.	.	.							.	.																		.	.
Template Conservation											.	.	.	.	.							.	.																		.	.
Template Sequence		K	S	V	S	Q	L	Y	T	G	.	.	.	.	.	V	K	P	E	Q	I	.	.	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	.	.	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K	S	L	G	A	E	V	D	L	W	Q	I	E	E	E	N	G	W
Template Known Secondary structure						T	T	S	S	S	.	.	.	.	.			G	G	G		.	.				S														.	.			T	T								S	S		T									T	T										G	G	G	T	T
Template Predicted Secondary structure											.	.	.	.	.							.	.																		.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.						.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H
Query Conservation
Alig confidence													.	.	.																																																						.	.	.	.	.	.
Template Conservation													.	.	.																																																						.	.	.	.	.	.
Template Sequence		L	P	D	L	E	K	L	R	Q	L	I	.	.	.	R	P	T	T	K	X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D	V	.	.	.	.	.	.	P	S	I	I	E	V	Y
Template Known Secondary structure													.	.	.		T	T								S	S		T	T	T																		T	T	T									S				S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.																																																						.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R
Query Conservation
Alig confidence													.																.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation													.																.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		D	K	G	I	A	V	N	S	L	S	T	.	Y	S	L	P	G	I	R	I	G	W	V	A	A	N	H	.	.	.	.	.	.	.	Q	V	T	D	I	L	R	D	Y	R	D	Y	T	X	I	C	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	H	.	.	.	.	.	.	Y	Q	E	I	L	E	R	N	R
Template Known Secondary structure		T	T										.		S		G	G	G										.	.	.	.	.	.	.							T	T	T	G	G	G	T	T	S																T	.	.	.	.	.	.
Template Predicted Secondary structure													.																.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																									.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	.	.	.	.	.	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P
Query Conservation																																									.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																		.	.	.	.	.																				.	.	.	.	.	.	.	.						.
Template Conservation																					.	.	.																																																							.
Template Sequence		H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	.	.	.	V	S	Y	I	R	P	A	V	V	S	T	S	F	V	K	I	A	V	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	E	R	D	G	Y	V	R	L	G	F	A	.	C	E	Q
Template Known Secondary structure																			T	T	.	.	.							S	S	S	S									S	S																				G	G	G	G	T		T	T								.	S
Template Predicted Secondary structure																					.	.	.																																																							.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	L	I	K	G	L	E	K	L	S	Q	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions