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Job DescriptionP00509
Confidence99.71%DateThu Jan 5 10:56:40 GMT 2012
Rank224Aligned Residues339
% Identity17%Templatec3oksB_
PDB info PDB header:transferaseChain: B: PDB Molecule:4-aminobutyrate transaminase; PDBTitle: crystal structure of 4-aminobutyrate transaminase from mycobacterium2 smegmatis
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  KINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGAL
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Template Sequence  LIDLGSGIAVTTVGNSA. . PKVVEAVRSQVGD. . FTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKR. . . SALFNSGSEAV
Template Known Secondary structure  SST
TT
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TTTTS

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   5960.........70..... ....80........ .90.........100.........110.........120 .........130.
 
   108.110.........120.........130.........140. ........150.. .......
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Query Sequence  RVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAG. . . . . . . . . . . . . . LEVREYAYYDA. . . . . . . . . . . . . . ENHTLDF
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Template Sequence  ENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRA
Template Known Secondary structure 


TT



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TTTTTT

S

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GGG
T
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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI
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Template Sequence  ITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA. . MFACEHEGIDPD. . .
Template Known Secondary structure  T
GGG
SSBTTTT
B


TTTT

TTTTTTTTSS..SSGGGTTT


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   212.......220.........230.........240.........250.........260.........270.... .....280......
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  VASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQ
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Template Sequence  . LIVTAGIAG. . GLPLSAVTGR. . . . . . . AEIMDSPHVSGLGGTYGGNPIACAAALATIE. . . . . . . . TIESEGLVARAQ
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TTT..TSS
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S
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   287..290..... ....300..... ....310.........320.........330...... ...340........
 
   320.........330.........340.........350.... .....360.........370... .... ..380.
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Query Sequence  RMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT. . . . . . . . . . . KEQVLRLREEFGVYAVASG. . . . . . RVNV. AGMT
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Template Sequence  QIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIG
Template Known Secondary structure 
TTTTBSTTS

B
TT

TTS



TT

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   350.........360.........370.........380.........390.........400.........410.........420.........
 
   382.......390......
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Query Sequence  PDNMAPLCEAIVAVL
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Template Sequence  DDLLNEGLDVLEEVL
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   430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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