Job Description P00509 Confidence 99.96% Date Thu Jan 5 10:56:40 GMT 2012 Rank 90 Aligned Residues 345 % Identity 14% Template c3nnkC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway Resolution 2.58 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.													.	.	.	.											.	.																					.	.	.
Template Conservation																		.	.	.	.	.	.	.													.	.	.	.											.	.																					.	.	.
Template Sequence		Q	F	S	Q	L	N	P	P	S	R	L	L	M	G	P	G	.	.	.	.	.	.	.	P	I	N	A	D	P	R	V	L	R	A	M	.	.	.	.	S	S	Q	L	I	G	Q	Y	D	P	.	.	A	M	T	H	Y	M	N	E	V	M	A	L	Y	R	G	V	F	R	T	E	.	.	.	N	R	W	T	M	L
Template Known Secondary structure		T	S		S										S	S	S	.	.	.	.	.	.	.													.	.	.	.	T	S					T	T			.	.																		T			.	.	.		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.													.	.	.	.											.	.																					.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20								.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H
Query Conservation
Alig confidence																		.	.																																																									.	.
Template Conservation																		.	.																																																									.	.
Template Sequence		V	D	G	T	S	R	A	G	I	E	A	I	L	V	S	A	.	.	I	R	P	G	D	K	V	L	V	P	V	F	G	R	F	G	H	L	L	C	E	I	A	R	R	C	R	A	E	V	H	T	I	E	V	P	W	G	E	V	F	T	P	D	Q	V	E	D	A	V	K	R	I	R	P	R	.	.	L	L	L	T
Template Known Secondary structure			S	S														.	.			T										S													T	T										T	T																		S	.	.
Template Predicted Secondary structure																		.	.																																																									.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	.	.	.	.	.	.	.	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence														.	.	.																											.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		V	Q	G	D	T	S	T	T	M	L	Q	P	.	.	.	L	A	E	L	G	E	I	C	R	R	Y	D	A	L	F	Y	T	D	A	T	A	S	L	G	G	N	P	L	E	T	D	V	W	G	L	D	A	V	S	A	G	M	Q	C	L	G	G	P	S	G	T	S	P	I	T	L	S	A	R	M	E	E	A	I	R
Template Known Secondary structure			S			T	T	T	T					.	.	.		T	T								T	T								T	T	T	B	T	T	B				T	T	T	T	T		S													S	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
						244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																		.																							.	.	.	.	.
Template Conservation																																							.																							.	.	.	.	.
Template Sequence		R	R	K	C	V	E	E	G	I	R	T	D	A	H	R	D	G	D	E	E	M	I	Y	S	N	Y	F	D	L	G	M	V	M	D	Y	W	G	.	P	E	R	L	N	H	H	T	E	A	T	T	A	L	F	G	A	R	E	C	A	R	.	.	.	.	.	L	I	L	Q	E	G	L	D	Y	G	I	A	R	H	K
Template Known Secondary structure		T	T					T	T	S			T	T					S	S				S		S	T	T										S	.	T	T				S	S																.	.	.	.	.
Template Predicted Secondary structure																																							.																							.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.						.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.			.	.	380	.
Predicted Secondary structure																															.	.	.								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Query SS confidence																															.	.	.								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Query Sequence		R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	.	.	.	S	F	S	G	L	T	K	.	.	.	.	.	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N	V	.	.	A	G	M	T
Query Conservation																															.	.	.								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Alig confidence																.	.	.	.												.	.	.								.	.	.	.	.																			.	.	.	.	.	.	.	.					.	.
Template Conservation																.	.	.	.
Template Sequence		L	H	G	D	A	L	V	K	G	I	Q	A	M	G	.	.	.	.	L	E	T	F	G	D	L	K	H	K	M	N	N	V	L	G	V	V	I	P	Q	G	I	N	G	D	Q	A	R	K	L	M	L	E	D	F	G	I	E	I	G	T	S	F	G	P	L	H	G	K	V	W	R	I	G	T	M	G	Y	N	A	R
Template Known Secondary structure														T	T	.	.	.	.			B		S		G	G	G	B		T	T								S	S	S																		B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	C	V	M	T	T	L	S	A	L	E	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions