Job Description P00509 Confidence 99.57% Date Thu Jan 5 10:56:40 GMT 2012 Rank 232 Aligned Residues 343 % Identity 13% Template c3n5mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase Resolution 2.05 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R
Query Conservation
Alig confidence																		.	.															.	.	.																								.	.	.	.	.
Template Conservation																		.	.															.	.	.																								.	.	.	.	.
Template Sequence		L	D	G	X	S	G	L	W	C	V	N	S	G	Y	G	R	.	.	K	E	L	A	E	A	A	Y	K	Q	L	Q	T	L	.	.	.	S	Y	F	P	X	S	Q	S	H	E	P	A	I	K	L	A	E	K	L	N	E	W	L	.	.	.	.	.	G	G	E	Y	V	I	F	F	S	N	S	G	S	E	A	N	E
Template Known Secondary structure				T	T					T		T	T		B			.	.												T	T		.	.	.	S				T	T	S																	.	.	.	.	.	T	S								S	S
Template Predicted Secondary structure																		.	.															.	.	.																								.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.														.	.	.	.	.	.											150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	A	D	F	L	A	K	N	T	S	.	.	.	.	.	.	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	E	Y	A	Y	.	.	.	.	.	.	.	.	.	.	Y	D	A	E	N	H	T	L	D	F
Query Conservation													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	F	K	I	A	R	Q	Y	Y	A	Q	K	G	E	P	H	R	Y	K	F	X	S	R	Y	R	G	Y	H	G	N	T	X	A	T	X	A	A	T	G	Q	A	Q	R	R	Y	Q	Y	E	P	F	A	S	G	F	L	H	V	T	P	P	D	C	Y	R	X	P	G	I	E	R	E	N	I	Y	D	V	E	C	V
Template Known Secondary structure													T	T	T		T	T								T	T					S	S						S				G	G	G	T	T	T	T					S										T	T	T	S	T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure								.																						.
Query SS confidence								.																						.
Query Sequence		D	A	L	I	N	S	.	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	.	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E
Query Conservation								.																						.
Alig confidence								.																						.																																					.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		K	E	V	D	R	V	X	T	W	E	L	S	E	T	I	A	A	F	I	X	E	P	I	I	T	G	G	G	I	L	X	A	P	Q	D	Y	X	K	A	V	H	E	T	C	Q	K	H	G	A	L	L	I	S	D	E	V	I	C	G	F	G	R	T	G	K	.	.	.	A	F	G	F	X	N	Y	D	V	K	P	D
Template Known Secondary structure													G	G	G								S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	.	.	.	S	S	G	G	G	G	T	T				S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R
Query Conservation
Alig confidence				.	.	.																																			.																							.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																			.																							.	.	.	.	.	.	.	.
Template Sequence		I	I	.	.	.	T	X	A	K	G	I	T	S	A	Y	L	P	L	S	A	T	A	V	K	R	E	I	Y	E	A	F	K	G	K	G	E	Y	E	F	.	F	R	H	I	N	T	F	G	G	N	P	A	A	C	A	L	A	L	K	N	L	E	.	.	.	.	.	.	.	.	I	I	E	N	E	N	L	I	E	R
Template Known Secondary structure				.	.	.				G	G	G	G	T	T	S	S													G	G	G		S	S	S	T	T		S	.						S	S	S	S														.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure				.	.	.																																			.																							.	.	.	.	.	.	.	.
Template SS confidence
		276	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.														.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query Sequence		I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	Q	X	G	S	L	L	L	E	Q	L	K	E	E	I	G	E	H	P	L	V	G	D	I	R	G	K	G	L	L	V	G	I	E	L	V	N	D	K	E	T	K	E	P	I	D	N	D	K	I	A	S	V	V	N	A	C	K	E	K	G	L	I	I	G	R	N	G	X	T	T	A	G	Y	N	N	I	L	T
Template Known Secondary structure																		T	T	S	T	T							S	S	S										T	T	T	T																		T	T							T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		377	.				.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		V	A	.	.	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		L	A	P	P	L	V	I	S	S	E	E	I	A	F	V	I	G	T	L	K	T	A	X
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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