Job Description P00509 Confidence 99.95% Date Thu Jan 5 10:56:40 GMT 2012 Rank 98 Aligned Residues 372 % Identity 12% Template c3mc6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1 Resolution 3.15 Å

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		2	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																																		.
Query SS confidence								.	.																																		.
Query Sequence		F	E	N	I	T	A	.	.	A	P	A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	.	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T
Query Conservation								.	.																																		.
Alig confidence								.	.																				.	.													.
Template Conservation																													.	.
Template Sequence		F	P	Q	L	P	S	N	G	I	P	Q	D	D	V	I	E	E	L	N	K	L	N	D	L	I	P	H	.	.	T	Q	W	K	E	G	K	V	S	G	A	V	Y	H	G	G	D	D	L	I	H	L	Q	T	I	A	Y	E	K	Y	C	V	A	N	Q	L	H	P	D	V	F	P	A	V	R	K	M	E	S	E	V
Template Known Secondary structure			S	S			S	S																	S	S			.	.			G	G	G	T		B	S	S	S		S																	T	S	S		B	T	T		T	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	.	.	.	.	.	.	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A
Query Conservation																																										.	.	.	.	.	.
Alig confidence																			.	.																						.	.	.	.	.	.																																.
Template Conservation																			.	.																																																											.
Template Sequence		V	S	M	V	L	R	M	F	N	A	P	S	D	T	G	C	G	.	.	T	T	T	S	G	G	T	E	S	L	L	L	A	C	L	S	A	K	M	Y	A	L	H	H	R	G	I	T	E	P	E	I	I	A	P	V	T	A	H	A	G	F	D	K	A	A	Y	Y	F	G	M	K	L	R	H	V	E	L	.	D	P
Template Known Secondary structure									T	T			T	T	T				.	.				S	S																				S			S	S							T	T	S											S									B	.		T
Template Predicted Secondary structure																			.	.																																																											.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	.	.	R	G	L	E	E	D	A	E	G	L	R	A
Query Conservation																																																																				.	.
Alig confidence																.	.	.																						.	.	.																										.	.
Template Conservation																.	.	.																						.	.	.
Template Sequence		T	T	Y	Q	V	D	L	G	K	V	K	K	F	I	.	.	.	N	K	N	T	V	L	L	V	G	S	A	P	N	F	P	H	G	I	A	D	D	.	.	.	I	E	G	L	G	K	I	A	Q	K	Y	K	L	P	L	H	V	D	S	C	L	G	S	F	I	V	S	F	M	E	K	A	G	Y	K	N	L	P	L
Template Known Secondary structure		T	T		S	B		T	T	T	T	G	G	G		.	.	.		S	S								T	T		T	T	T					S	.	.	.		T	T	T	T	T					T	T							T	T	T	T					G	G	G	T	T	T	T			S
Template Predicted Secondary structure																.	.	.																						.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.											280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	.	.	.	.	.	.	.	.	.	.	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		L	D	F	R	V	P	G	V	T	S	I	S	C	D	T	H	K	Y	G	F	A	P	K	G	S	S	V	I	M	Y	R	N	S	.	.	.	.	.	.	D	L	R	M	H	Q	Y	Y	V	N	P	A	W	T	G	G	L	Y	G	S	P	T	L	A	G	S	R	P	G	A	I	V	V	G	C	W	A	T	M	V	N
Template Known Secondary structure			S	T	T	S	T	T								T	T	T	T	T				S	S							S	S		.	.	.	.	.	.				T	T	T	S			B	T	T		T	T	S		B			S	S	S		S	S		B
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.						370	.	.	.
Predicted Secondary structure																																																					.	.																			.	.	.	.	.
Query SS confidence																																																					.	.																			.	.	.	.	.
Query Sequence		D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	.	.	.	.	.	V	A	S	G
Query Conservation																																																					.	.																			.	.	.	.	.
Alig confidence				.	.	.	.	.																										.																			.	.																			.	.	.	.	.
Template Conservation				.	.	.	.	.																										.
Template Sequence		M	G	.	.	.	.	.	E	N	G	Y	I	E	S	C	Q	E	I	V	G	A	A	M	K	F	K	K	Y	I	Q	E	N	.	I	P	D	L	D	I	M	G	N	P	R	Y	S	V	I	S	F	S	S	K	T	L	N	I	H	E	L	S	D	R	L	S	K	K	G	W	H	F	N	A	L	Q	K	P	V	A	L
Template Known Secondary structure				.	.	.	.	.																									S	.		T	T					S				S	S							T	T	T	T										T	T	T		B						S	S
Template Predicted Secondary structure				.	.	.	.	.																										.
Template SS confidence
		438	.						440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	A	F	T	R	L	S	A	H	V	V	D	E	I	C	D	I	L	R	T	T	V
Template Known Secondary structure							T	T	T	T		T
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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