Job Description P00509 Confidence 99.96% Date Thu Jan 5 10:56:40 GMT 2012 Rank 91 Aligned Residues 357 % Identity 12% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		2	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		F	E	N	I	T	A	.	.	A	P	A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q
Query Conservation								.	.
Alig confidence								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		H	A	R	L	P	R	A	G	L	P	R	A	E	I	L	A	E	I	A	A	M	G	A	G	A	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	H	H	I	A	F	L	N	E	V	Y	A	L	Q	S	Q	S	N	P	L	H	.	P	D	L	W	P	S	T	A	K	F	E	A	E	V	V
Template Known Secondary structure			S	S			S	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T			T	T		.	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	.	.	.	.	.	.	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E
Query Conservation																																								.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.																																	.	.
Template Conservation																																																																														.	.
Template Sequence		A	M	T	A	H	M	L	G	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A	T	K	G	I	T	A	P	E	A	V	V	P	V	S	A	H	A	A	F	D	K	A	A	Q	Y	F	G	I	K	L	V	R	T	P	L	.	.	D	A
Template Known Secondary structure								T	T	T	T	T	T	T	S								S	S																							S	S							T	T	S		T										T								B	.	.		T
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	.	G	L	E	E	D	A	E	G	L	R	A	F	A
Query Conservation																																																																				.
Alig confidence															.	.	.																						.	.	.																											.
Template Conservation															.	.	.																						.	.	.
Template Sequence		D	Y	R	A	D	V	A	A	M	R	E	A	I	.	.	.	T	P	N	T	V	V	V	A	G	S	A	P	G	Y	P	H	G	V	V	D	P	.	.	.	I	P	E	I	A	A	L	A	A	E	H	G	I	G	C	H	V	D	A	C	L	G	G	F	I	L	P	W	A	E	R	L	G	Y	P	V	P	P	F	D
Template Known Secondary structure		T	S	S	B										.	.	.		T	T								T	T		T	T	T						.	.	.												T								T	T	T	T	T	T						T	T	T							S
Template Predicted Secondary structure															.	.	.																						.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.											280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	.	.	.	.	.	.	.	.	.	.	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																	.	.	.	.	.	.																																									.	.	.
Template Sequence		F	R	L	E	G	V	T	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	.	.	.	.	.	.	D	L	L	H	Y	Q	Y	F	I	A	A	D	W	P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P	G	A	L	S	A	T	A	W	A	A	M	L	.	.	.
Template Known Secondary structure		T	T	S	T	T								T	T	T	T	T				S	S							S	S		.	.	.	.	.	.											S	S		T	T						S	S	S		S	S															.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.																																									.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.							.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.						370	.	.	.	.	.
Predicted Secondary structure																																																		.	.																				.	.	.	.	.
Query SS confidence																																																		.	.																				.	.	.	.	.
Query Sequence		L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	.	.	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	.	.	.	.	.	V	A	S	G	R	V
Query Conservation																																																		.	.																				.	.	.	.	.
Alig confidence		.	.																															.	.	.														.	.																				.	.	.	.	.
Template Conservation		.	.																															.	.	.
Template Sequence		.	.	S	L	G	E	E	G	Y	L	D	A	T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	P	S	.	.	.	L	K	I	L	G	D	P	L	W	V	I	A	V	A	S	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	L	H	R	P	P	A	F	H	V
Template Known Secondary structure		.	.																											T	S	T	T	.	.	.				S	S			S	S							S	S	S												T	T							T	T	T	T
Template Predicted Secondary structure		.	.																															.	.	.
Template SS confidence
				368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.				.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		376	.	.			.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		N	V	A	.	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		A	L	T	L	R	H	T	E	P	G	V	V	D	R	F	L	A	D	L	Q	D	A	V
Template Known Secondary structure					G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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