Job Description P00509 Confidence 99.92% Date Thu Jan 5 10:56:40 GMT 2012 Rank 133 Aligned Residues 321 % Identity 13% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	I	S	G	H	G	K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	.	.	.	.	.	.	.	.	.	.	G	X	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L	R	I	W	S
Template Known Secondary structure				S	S	B	S	S												T	T	S		T	T						T	T			T	T												T	.	.	.	.	.	.	.	.	.	.	T		S						S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	.	.	.	.	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L
Query Conservation																	.	.	.	.
Alig confidence		.															.	.	.	.																							.	.	.	.	.	.	.
Template Conservation		.																																									.	.	.	.	.	.	.
Template Sequence		.	D	E	T	D	N	R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	A	A	D	R	.	.	.	.	.	.	.	L	X	T	L	D	E	I	K	A	L	P	D	I	A	C	L	L	L	E	L	P	Q	R	E	I	G	G	V	A	P	A	F
Template Known Secondary structure		.				T								T	T						S	S	T	T						S	S							S		T	T	S	.	.	.	.	.	.	.												S		S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure		.																																									.	.	.	.	.	.	.
Template SS confidence
			83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A
Query Conservation
Alig confidence																																													.	.	.	.															.	.	.								.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.															.	.	.								.	.	.	.	.	.	.
Template Sequence		S	E	L	E	T	I	S	R	Y	C	R	E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	.	.	.	.	S	I	Y	I	S	F	Y	G	L	G	G	I	A	G	.	.	.	A	I	L	A	G	P	A	.	.	.	.	.	.	.	A	F
Template Known Secondary structure															T								T	T									T								T	T		S	.	.	.	.												S	S		.	.	.								.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.															.	.	.								.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.								.	220
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		C	Q	T	A	R	I	W	K	R	R	Y	G	G	D	L	I	S	L	Y	P	Y	I	V	S	A	D	Y	Y	.	.	.	.	.	.	.	.	Y	E	L	R	K	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	E	V	P	V	S	N	X	F	H	L	H	F
Template Known Secondary structure													T				S													.	.	.	.	.	.	.	.					T	T																			S	T	T					S	S	S		S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.									250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		352	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.										.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.
Query SS confidence						.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.
Query Sequence		G	L	T	K	.	.	.	.	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	R	V	N	V	A	.	.	.	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation						.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.
Alig confidence						.	.	.	.																			.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		D	G	Q	A	A	D	I	S	P	K	L	E	Q	V	Q	E	E	T	G	L	G	F	V	G	Y	L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A	F
Template Known Secondary structure			S																				S		S						S	S								B						T	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions