Job Description P00509 Confidence 99.79% Date Thu Jan 5 10:56:40 GMT 2012 Rank 207 Aligned Residues 342 % Identity 14% Template c3lv2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin Resolution 2.18 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R
Query Conservation
Alig confidence																		.	.																	.	.																												.	.	.	.
Template Conservation																		.	.																	.	.																												.	.	.	.
Template Sequence		L	D	A	M	S	S	W	W	T	A	I	H	G	H	G	H	.	.	P	A	L	D	Q	A	L	T	T	Q	L	R	V	M	N	H	.	.	V	M	F	G	G	L	T	H	E	P	A	A	R	L	A	K	L	L	V	D	I	T	P	A	G	L	D	.	.	.	.	T	V	F	F	S	D	S	G	S	V	S	V	E
Template Known Secondary structure				T	T					T		T	T		B	S		.	.															S		.	.			S	S	S																	S	S	T	T			.	.	.	.						S	S
Template Predicted Secondary structure																		.	.																	.	.																												.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.															.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	A	D	F	L	A	K	.	.	.	.	.	.	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E
Query Conservation										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	K	M	A	L	Q	Y	W	R	G	R	G	L	P	G	K	R	R	L	M	T	W	R	G	G	Y	H	G	D	T	F	L	A	M	S	I	C	D	P	H	G	G	M	H	S	L	W	T	D	V	L	A	A	Q	V	F	A	P	Q	V	P	R	D	Y	D	P	A	Y	S	A	A	F	E	A	Q	L	A	Q
Template Known Secondary structure													T	T	T		T	T								T	T					S	S					T	T	S		T	T	T	T	T	G	G	G	T		S	S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure														.										.
Query SS confidence														.										.
Query Sequence		A	Q	A	G	D	V	V	L	F	H	G	C	.	C	H	N	P	T	G	I	D	P	.	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K
Query Conservation														.										.
Alig confidence														.										.																																		.	.	.															.	.	.
Template Conservation																																																										.	.	.															.	.	.
Template Sequence		H	A	G	E	L	A	A	V	V	V	E	P	V	V	Q	G	A	G	G	M	R	F	H	D	P	R	Y	L	H	D	L	R	D	I	C	R	R	Y	E	V	L	L	I	F	D	E	I	A	T	G	F	G	R	T	G	A	.	.	.	L	F	A	A	D	H	A	G	V	S	P	D	I	M	.	.	.	C	V	G	K
Template Known Secondary structure			G	G	G								S	S				T	T	T						T													T	T								T	T	T	T	T	T	T	T	S	S	.	.	.	S	S	G	G	G	G	T	T				S			.	.	.				G
Template Predicted Secondary structure																																																										.	.	.															.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V
Query Conservation
Alig confidence																											.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		A	L	T	G	G	Y	L	S	L	A	A	T	L	C	T	A	D	V	A	H	T	I	S	A	G	.	.	.	.	A	A	L	M	R	G	P	T	F	M	A	N	P	L	A	C	A	V	S	V	A	S	V	E	.	.	.	.	.	.	.	.	L	L	L	G	Q	D	W	R	T	R	I	T	E	L	A	A	G	L	T
Template Known Secondary structure		G	G	G	T	T	S	S																		S	.	.	.	.					S			T	T	T	T														.	.	.	.	.	.	.	.				T	S
Template Predicted Secondary structure																											.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.									.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																							.	.	.						.
Query SS confidence																											.	.	.																							.	.	.						.
Query Sequence		N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	R	V	N	V	A	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																											.	.	.																							.	.	.						.
Alig confidence																											.	.	.																							.	.	.						.
Template Conservation
Template Sequence		A	G	L	D	T	A	R	A	L	P	A	V	T	D	V	R	V	C	G	A	I	G	V	I	E	C	D	R	P	V	D	L	A	V	A	T	P	A	A	L	D	R	G	V	W	L	R	P	F	R	N	L	V	Y	A	M	P	P	Y	I	C	T	P	A	E	I	T	Q	I	T	S	A	M	V	E	V	A
Template Known Secondary structure					G	G	G	G	G	S	T	T								S	S							S	S													T	T	T						B	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions