Job Description P00509 Confidence 99.89% Date Thu Jan 5 10:56:40 GMT 2012 Rank 157 Aligned Residues 330 % Identity 15% Template c3l44A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1; PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase Resolution 2.05 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																			.	.																		.																							.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																		.																							.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	D	Y	L	A	A	Y	G	P	I	I	T	G	H	A	H	.	.	P	H	I	T	K	A	I	T	T	A	A	E	N	G	V	L	Y	.	G	T	P	T	A	L	E	V	K	F	A	K	X	L	K	E	A	X	P	A	L	D	.	.	.	.	.	.	.	.	.	K	V	R	F	V	N	S	G	T	E	A	V
Template Known Secondary structure							G	G	G	T	T		S	S		B	T		.	.															S			.	S	S																	T	T		S	.	.	.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																			.	.																		.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.												.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	.	.	.	.	.	.	.	.	.	.	.	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		X	T	T	I	R	V	A	R	A	Y	T	G	R	T	K	I	X	K	F	A	G	C	Y	H	G	H	S	D	L	V	L	V	A	L	G	T	P	D	S	A	G	V	P	Q	S	I	A	Q	E	V	I	T	V	P	F	N	.	.	.	.	.	N	V	E	T	L	K	E	A	L	D	K	W	G	H	E	V	A	A	I
Template Known Secondary structure																					T	T					S	S	G	G	G	G	B					B	S	S	T	T							T	T						T	T	.	.	.	.	.													G	G	G
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		F	H	G	C	C	H	N	P	T	G	I	D	P	.	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V
Query Conservation															.
Alig confidence															.																																.	.	.	.																							.	.	.	.	.
Template Conservation																																															.	.	.	.																							.	.	.	.	.
Template Sequence		L	V	E	P	I	V	G	N	F	G	I	V	E	P	K	P	G	F	L	E	K	V	N	E	L	V	H	E	A	G	A	L	V	I	Y	D	E	V	I	T	A	F	R	F	X	.	.	.	.	Y	G	G	A	Q	D	L	L	G	V	T	P	D	L	T	A	L	G	V	I	G	G	.	.	.	.	.	G	L	P	I
Template Known Secondary structure					S	S	B		T	T	S		B				T	T											T	T	T								T	T	T	T	T	T	S	S	.	.	.	.	S	S							T				S							T	T	T	.	.	.	.	.	T	S	S
Template Predicted Secondary structure																																															.	.	.	.																							.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N
Query Conservation
Alig confidence																			.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		G	A	Y	G	G	K	K	E	I	X	E	Q	V	A	P	L	G	.	.	.	.	P	A	Y	Q	A	G	T	X	A	G	N	P	A	S	X	A	S	G	I	A	C	L	E	.	.	.	.	.	.	.	.	V	L	Q	Q	E	G	L	Y	E	K	L	D	E	L	G	A	T	L	E	K	G	I	L	E	Q	A	A	K
Template Known Secondary structure												T	T	B	T	T	T	S	.	.	.	.	S	B					T	T	T	T														.	.	.	.	.	.	.	.			T	S	T	T
Template Predicted Secondary structure																			.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.									.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.						.
Template Conservation																																																																		.
Template Sequence		H	N	I	D	I	T	L	N	R	L	K	G	A	L	T	V	Y	F	T	T	N	T	I	E	D	Y	D	A	A	Q	D	T	D	G	E	X	F	G	K	F	F	K	L	X	L	Q	E	G	V	N	L	A	P	S	K	Y	E	A	W	F	L	T	T	E	.	H	T	K	E	D	I	E	Y	T	I	E	A	V	G	R
Template Known Secondary structure		T	T									T	T							S	S	S				S							S															T	T					S	S	T	T							T	T	.
Template Predicted Secondary structure																																																																		.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		395	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		426	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions