Job Description P00509 Confidence 99.85% Date Thu Jan 5 10:56:40 GMT 2012 Rank 185 Aligned Residues 293 % Identity 15% Template c3ke3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative serine-pyruvate aminotransferase; PDBTitle: crystal structure of putative serine-pyruvate aminotransferase2 (yp_263484.1) from psychrobacter arcticum 273-4 at 2.20 a resolution Resolution 2.20 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	.	.	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y
Query Conservation																																																														.	.
Alig confidence																			.	.	.	.	.																					.	.	.																.	.
Template Conservation																			.	.	.	.	.																					.	.	.
Template Sequence		E	V	X	N	D	L	L	S	N	L	K	T	V	Y	N	A	E	.	.	.	.	.	A	A	V	I	I	P	G	S	G	T	Y	G	X	E	A	V	A	R	Q	L	.	.	.	T	I	D	E	D	C	L	I	I	R	N	G	W	F	S	Y	R	W	T	Q	I	L	E	K	G	K	F	A	K	S	S	T	V	L	T
Template Known Secondary structure																T		S	.	.	.	.	.							S														.	.	.		T	T									S																S	S
Template Predicted Secondary structure																			.	.	.	.	.																					.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		151	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.
Query Sequence		D	A	E	N	H	T	L	.	.	.	.	.	.	.	.	.	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L
Query Conservation									.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																	.	.
Template Sequence		A	E	R	T	E	D	T	E	A	P	K	P	F	A	P	V	D	I	E	T	A	V	A	K	I	K	E	D	K	S	A	.	.	I	V	Y	A	P	H	V	E	T	S	S	G	I	I	L	S	E	E	Y	I	K	A	L	S	E	A	V	H	S	V	G	G	L	L	V	I	D	C	I	A	S	G	C	V	W	L	D
Template Known Secondary structure					S	S			S	S																				T		S	.	.						S			T	T	T	T																		T	T								T	T		T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	X	K	E	L	G	I	D	V	L	I	S	A	P	Q	G	W	S	S	T	P	C	.	.	A	G	L	V	X	L	S	A	A	A	I	K	K	V	E	S	T	E	S	N	C	F	S	L	D	L	K	Q	W	L	T	I	X	R	A	Y	E	N	G	G	H	A	Y	H	A	T	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.					T		S											S				.	.																T				S		S	T	T														T	T	S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
												184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.						.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	.	.	.	.	.	Q	N	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L
Query Conservation																																																											.	.	.	.	.
Alig confidence															.	.	.	.	.																														.	.	.	.							.	.	.	.	.
Template Conservation															.	.	.	.	.																														.	.	.	.
Template Sequence		P	T	D	S	L	R	Q	F	R	D	A	I	L	.	.	.	.	.	E	A	K	E	I	G	F	D	I	L	R	D	A	Q	W	E	L	G	N	R	V	R	K	V	L	T	D	K	G	.	.	.	.	I	E	S	V	A	A	E	G	F	E	A	P	G	V	V	V	S	Y	T	E	R	D	D	X	H	K	G	S	A
Template Known Secondary structure															.	.	.	.	.																												T	T	.	.	.	.			B	S	B		T	T		B		S	S							S						S	S
Template Predicted Secondary structure															.	.	.	.	.																														.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.														.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	A	G	.	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		F	A	E	A	G	L	Q	I	A	A	G	V	P	L	K	V	G	E	P	D	N	F	K	T	F	R	L	G	L	F	G	L	D	K	L	T	D	I	D	G	T	V	E	R	F	E	K	A	L
Template Known Secondary structure					T	T										S	S				T	T										S					T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions