Job Description P00509 Confidence 99.90% Date Thu Jan 5 10:56:40 GMT 2012 Rank 152 Aligned Residues 323 % Identity 15% Template c3ju7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative plp-dependent aminotransferase; PDBTitle: crystal structure of putative plp-dependent aminotransferase2 (np_978343.1) from bacillus cereus atcc 10987 at 2.19 a resolution Resolution 2.19 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V
Query Conservation
Alig confidence																														.	.														.	.	.	.	.	.							.	.																			.
Template Conservation																														.	.														.	.	.	.	.	.							.	.																			.
Template Sequence		A	S	T	V	P	V	I	E	Y	L	D	E	L	K	E	I	D	A	S	H	I	Y	T	N	Y	G	P	I	.	.	N	Q	R	F	E	Q	T	I	X	S	G	F	F	.	.	.	.	.	.	Q	N	R	G	A	V	.	.	T	T	V	A	N	A	T	L	G	L	X	A	A	I	Q	L	K	K	.	R	K	K	G
Template Known Secondary structure							G	G	G	T											T			S	S	S				.	.												T	S	.	.	.	.	.	.	T	T		S			.	.				S														S	.		T	T
Template Predicted Secondary structure																														.	.														.	.	.	.	.	.							.	.																			.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L
Query Conservation
Alig confidence																															.																						.	.	.																										.
Template Conservation																															.																						.	.	.																										.
Template Sequence		K	Y	A	L	X	P	S	F	T	F	P	A	T	P	L	A	A	I	W	C	G	L	E	P	Y	F	I	D	I	.	S	I	D	D	W	Y	X	D	K	T	V	L	W	D	K	I	E	E	L	K	E	.	.	.	E	V	A	I	V	V	P	Y	A	T	F	G	S	W	X	N	L	E	E	Y	E	E	L	E	K	.
Template Known Secondary structure								S	S	S		T									T	T								B	.		T	T	T		S	B													G	G	.	.	.	G							B		T	T	T	B													.
Template Predicted Secondary structure																															.																						.	.	.																										.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R
Query Conservation
Alig confidence		.	.	.																													.	.	.	.	.	.	.
Template Conservation		.	.	.																													.	.	.	.	.	.	.
Template Sequence		.	.	.	K	G	V	P	V	V	V	D	A	A	P	G	F	G	L	X	N	G	G	X	H	Y	G	Q	D	F	S	G	.	.	.	.	.	.	.	X	I	I	Y	S	F	H	A	T	P	F	G	I	G	E	G	G	L	I	Y	S	K	N	E	E	D	I	Q	R	I	K	R	X	G	N	F	G	F	D	T	N	R
Template Known Secondary structure		.	.	.		T			B					T	T		T	T				T	T			T	T	T	T		S	S	.	.	.	.	.	.	.							B							B	S							S												T	B	T	T	B		T	T	S
Template Predicted Secondary structure		.	.	.																													.	.	.	.	.	.	.
Template SS confidence
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.								.	.	.	350	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	.	.	.	.	.	.	.	M	F	S	F	S	G	L
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																																											.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		E	C	T	X	X	G	F	N	C	K	X	S	E	Y	A	A	A	I	G	.	.	.	.	.	I	A	T	X	K	K	W	D	D	K	L	K	E	R	T	R	I	S	E	W	Y	K	Q	L	L	Q	S	N	G	L	X	K	K	G	W	Q	L	Q	K	T	E	A	V	I	Q	Q	F	X	P	I	L	C	P	E	E	V
Template Known Secondary structure			B		S				B												.	.	.	.	.																												T	T	T	T	T	T	T		B					S		B			S	S							T	T	S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.																														.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	N	V	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		R	N	K	Q	V	I	E	D	L	K	K	Q	K	I	E	A	R	L	Y	F	S	P	S	C	H	Q	Q	V	L	F	R	N	Y	K	S	T	D	L	T	R	T	N	K	I	A	K	R	I	V	S	L	P	L	W	E	G	X	T	K	E	I	V	E	Q	I	V	I	C	L	G	Q
Template Known Secondary structure													T	T	B			B		T	T	S	S		G	G	G	S	G	G	G	T	T	S		B	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions