Job Description P00509 Confidence 99.95% Date Thu Jan 5 10:56:40 GMT 2012 Rank 103 Aligned Residues 334 % Identity 13% Template c3islA_ PDB info PDB header:transferase Chain: A: PDB Molecule:purine catabolism protein pucg; PDBTitle: crystal structure of ureidoglycine-glyoxylate aminotransferase (pucg)2 from bacillus subtilis Resolution 2.06 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T
Query Conservation
Alig confidence																.	.	.	.	.	.	.																	.	.	.	.	.	.																											.	.	.
Template Conservation																.	.	.	.	.	.	.																	.	.	.	.	.	.																											.	.	.
Template Sequence		R	E	L	C	T	P	L	R	T	I	M	T	P	G	.	.	.	.	.	.	.	P	V	E	V	D	P	R	V	L	R	V	M	S	T	P	V	.	.	.	.	.	.	V	G	Q	F	D	P	A	F	T	G	I	M	N	E	T	M	E	M	L	R	E	L	F	Q	T	K	.	.	.	N	R	W	A	Y	P	I	D
Template Known Secondary structure													S	S	S	.	.	.	.	.	.	.	S											T	T	S			.	.	.	.	.	.			T	T	S																		T	T			.	.	.		S
Template Predicted Secondary structure																.	.	.	.	.	.	.																	.	.	.	.	.	.																											.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20								.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C
Query Conservation
Alig confidence																.	.																																																									.	.
Template Conservation																.	.																																																									.	.
Template Sequence		G	T	S	R	A	G	I	E	A	V	L	A	S	V	.	.	I	E	P	E	D	D	V	L	I	P	I	Y	G	R	F	G	Y	L	L	T	E	I	A	E	R	Y	G	A	N	V	H	M	L	E	C	E	W	G	T	V	F	D	P	E	D	I	I	R	E	I	K	K	V	K	P	K	.	.	I	V	A	M	V	H
Template Known Secondary structure		S														.	.			T	T								S	S													T	T										T	T																		S	.	.						S
Template Predicted Secondary structure																.	.																																																									.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L
Query Conservation
Alig confidence												.	.	.																														.	.	.	.	.	.	.	.	.																			.
Template Conservation												.	.	.																														.	.	.	.	.	.	.	.	.																			.
Template Sequence		G	E	T	S	T	G	R	I	H	P	.	.	.	L	K	A	I	G	E	A	C	R	T	E	D	A	L	F	I	V	D	A	V	A	T	I	G	G	C	E	V	K	.	.	.	.	.	.	.	.	.	V	D	E	W	K	I	D	A	A	I	G	G	T	Q	K	C	L	S	.	V	P	S	G	M	A	P	I	T	Y
Template Known Secondary structure				T	T	T	T					.	.	.											T	T								T	T	T	T	T	T	S				.	.	.	.	.	.	.	.	.	T	T	T	T	T		S						S	S	S	T	T		.			S	S
Template Predicted Secondary structure												.	.	.																														.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.
		261	.	.	.	.	.	.	.	.														270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	A	D	S	E	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		N	E	R	V	A	D	V	I	A	A	R	N	R	P	I	T	S	N	Y	F	D	L	S	Q	L	E	D	Y	W	S	E	R	R	L	N	H	H	T	E	A	T	T	M	L	Y	A	L	R	E	G	V	R	.	.	.	.	.	L	V	L	E	E	G	L	E	T	R	F	E	R	H	R	H	H	E	A	A	L	A	A
Template Known Secondary structure											T						S		S	T	T									T	S	T	T				S	S																.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.							.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.						.	.																						.	.	.	.	.	.	.	.					.	.
Query SS confidence																						.	.	.	.	.	.						.	.																						.	.	.	.	.	.	.	.					.	.
Query Sequence		T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	.	.	.	.	.	.	F	S	F	S	G	.	.	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N	V	.	.	A	G	M	T	P	D	N	M	A	P	L	C
Query Conservation																						.	.	.	.	.	.						.	.																						.	.	.	.	.	.	.	.					.	.
Alig confidence								.	.	.	.											.	.	.	.	.	.						.	.																						.	.	.	.	.	.	.	.					.	.
Template Conservation								.	.	.	.
Template Sequence		G	I	K	A	M	G	.	.	.	.	L	R	L	F	G	D	D	S	C	K	M	P	V	V	T	C	V	E	I	P	G	G	I	D	G	E	S	V	R	D	M	L	L	A	Q	F	G	I	E	I	A	S	S	F	G	P	L	A	G	K	I	W	R	I	G	T	M	G	Y	S	C	R	K	E	N	V	L	F	V	L
Template Known Secondary structure						T	T	.	.	.	.			B		S		G	G	G	B		T	T								T	T																			B				S	T	T	T	T	T								G	G	G		S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		307	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	E	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions