Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 14 Aligned Residues 363 % Identity 14% Template c3ihjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp Resolution 2.30 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	.	.	.	.	.	.	.	.	.	.	.	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		E	I	E	L	E	L	Q	R	G	I	K	K	P	F	T	E	V	I	R	A	.	.	.	.	.	N	P	I	T	F	L	R	Q	V	M	A	L	C	T	Y	P	N	L	L	D	S	P	S	F	P	E	D	A	K	K	R	A	R	R	I	L	Q	A	C	S	Q	G	V	N	C	I	R	E	D	V	A	A	Y	I	T
Template Known Secondary structure									T	T				S	S	S	S		B			.	.	.	.	.																G	G	G	G	G		S	S	S																		S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		84	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																																				.	.	.	.
Query SS confidence				.																																				.	.	.	.
Query Sequence		G	K	.	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	.	.	.	.	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D
Query Conservation				.																																				.	.	.	.
Alig confidence				.											.	.																		.	.					.	.	.	.
Template Conservation															.	.																		.	.
Template Sequence		R	R	D	G	G	V	P	A	D	P	D	N	I	.	.	Y	L	T	T	G	A	S	D	G	I	S	T	I	L	K	I	L	.	.	V	S	G	G	G	K	S	R	T	G	V	M	I	P	I	P	Q	Y	P	L	Y	S	A	V	I	S	E	L	D	A	I	Q	V	N	Y	Y	L	D	E	E	N	C	W	A	L	N
Template Known Secondary structure				T	T	T					G	G	G		.	.				S	S													.	.					G	G	G	S								S			T									T	T									B	G	G	G	T	T	B
Template Predicted Secondary structure															.	.																		.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		159	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																																														.	.	.	.	.	.	.
Query SS confidence												.	.																																																														.	.	.	.	.	.	.
Query Sequence		F	D	A	L	I	N	S	L	N	E	.	.	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	.	.	.	.	.	.	.
Query Conservation												.	.																																																														.	.	.	.	.	.	.
Alig confidence												.	.																																																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	E	L	R	R	A	V	Q	E	A	K	D	H	C	D	P	K	V	L	C	I	I	N	P	G	N	P	T	G	Q	V	Q	S	R	K	C	I	E	D	V	I	H	F	A	W	E	E	K	L	F	L	L	A	D	E	V	Y	Q	D	N	V	Y	S	P	D	C	R	F	H	S	F	K	K	V	L	Y	E	M	G
Template Known Secondary structure													T	T	T	S									S	S		T	T	T																				T								T	T	T	T		B			T	T													T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.
Predicted Secondary structure																					.																																																						.	.	.	.
Query SS confidence																					.																																																						.	.	.	.
Query Sequence		A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	.	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	.	.	.	.	A	L	R
Query Conservation																					.																																																						.	.	.	.
Alig confidence																					.																												.	.	.	.	.																						.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		P	E	Y	S	S	N	V	E	L	A	S	F	H	S	T	S	K	G	Y	M	G	E	C	G	Y	R	G	G	Y	M	E	V	I	N	L	H	P	E	I	K	G	Q	L	V	K	L	L	.	.	.	.	.	S	V	R	L	C	P	P	V	S	G	Q	A	A	M	D	I	V	V	N	P	P	V	A	G	E	E	S	F
Template Known Secondary structure						T	T									S	S	S	S	T	T			S	S	S									S														.	.	.	.	.			S															T					T	T	S	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.						.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																		.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	.	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	Q	V	L	R	L	R	E	E	F	G
Query Conservation																														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.		.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		E	Q	F	S	R	E	K	E	S	V	L	G	N	L	A	K	K	A	K	L	T	E	D	L	F	N	Q	V	P	G	.	.	.	.	I	H	C	N	P	L	Q	G	A	M	Y	A	F	P	R	I	F	I	P	A	K	A	V	E	A	A	Q	A	H	Q	M	A	P	D	M	F	Y	C	M	K	L	L	E	E	T	G
Template Known Secondary structure																												T	S	T	T	.	.	.	.								B	S	S																			T	T	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.					430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		367	.	.	370	.	.	.												.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																									.
Template Sequence		I	C	V	V	P	G	S	G	F	G	Q	R	E	G	T	Y	H	F	R	M	T	I	L	.	P	P	V	E	K	L	K	T	V	L	Q	K	V	K	D	F	H
Template Known Secondary structure		B					G	G	G	T				T	T			B							.	S
Template Predicted Secondary structure																									.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.