Job Description P00509 Confidence 99.95% Date Thu Jan 5 10:56:40 GMT 2012 Rank 100 Aligned Residues 325 % Identity 16% Template c3hqtB_ PDB info PDB header:transferase Chain: B: PDB Molecule:cai-1 autoinducer synthase; PDBTitle: plp-dependent acyl-coa transferase cqsa Resolution 2.70 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	.	.	.	.	.	.	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A
Query Conservation																																													.	.	.	.	.	.
Alig confidence																							.	.	.	.																			.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	A	S	P	D	D	I	I	L	Q	S	N	D	Y	L	A	L	A	N	H	.	.	.	.	P	L	I	K	A	R	L	A	K	S	L	L	E	E	Q	Q	S	L	F	M	S	A	S	F	L	Q	N	D	Y	D	K	P	M	I	E	K	R	L	A	K	F	T	G	F	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S				T	T	S								T	T			T	T		.	.	.	.													S							S	B	G	G	G	G		S	T	T	T	S												T		S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V
Query Conservation
Alig confidence																					.	.																																			.	.	.	.	.	.	.															.	.
Template Conservation																					.	.																																			.	.	.	.	.	.	.															.	.
Template Sequence		E	C	L	L	S	Q	S	G	W	N	A	N	V	G	L	L	Q	T	I	.	.	C	Q	P	N	T	N	V	Y	I	D	F	F	A	H	M	S	L	W	E	G	A	R	Y	A	N	A	Q	A	H	P	F	M	H	N	.	.	.	.	.	.	.	N	C	D	H	L	R	M	L	I	Q	R	H	G	P	.	.	G	I
Template Known Secondary structure							S														.	.			T	T							T	T	S											T	T								T	T	.	.	.	.	.	.	.														S	.	.
Template Predicted Secondary structure																					.	.																																			.	.	.	.	.	.	.															.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V
Query Conservation
Alig confidence																				.	.	.																															.																										.	.	.
Template Conservation																				.	.	.																															.																										.	.	.
Template Sequence		I	V	V	D	S	I	Y	S	T	L	G	T	I	A	P	L	A	E	.	.	.	L	V	N	I	S	K	E	F	G	C	A	L	L	V	D	E	S	H	S	L	G	T	H	G	P	N	G	A	G	L	.	L	A	E	L	G	L	T	R	E	V	H	F	M	T	A	S	L	A	K	T	F	A	Y	R	A	.	.	.
Template Known Secondary structure						S	B		T	T	T			B						.	.	.								T	T								T	T	T	B	T	T	B	S	G	G	G				.				T	T		G	G	G		S						S	S	S	T	T		S	S		.	.	.
Template Predicted Secondary structure																				.	.	.																															.																										.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N
Query Conservation
Alig confidence																						.	.	.	.	.																				.	.	.	.	.	.	.																												.	.
Template Conservation																						.	.	.	.	.																				.	.	.	.	.	.	.																												.	.
Template Sequence		G	A	I	W	C	N	N	E	V	N	R	C	V	P	F	I	S	Y	P	A	.	.	.	.	.	I	F	S	S	T	L	L	P	Y	E	A	A	G	L	E	T	T	L	E	.	.	.	.	.	.	.	I	I	E	S	A	D	N	R	R	Q	H	L	D	R	M	A	R	K	L	R	I	G	L	S	Q	L	G	.	.
Template Known Secondary structure							S	S	S	G	G	G	T									.	.	.	.	.			S	B																.	.	.	.	.	.	.					T																					T	T	.	.
Template Predicted Secondary structure																						.	.	.	.	.																				.	.	.	.	.	.	.																												.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence																						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	.	.	.	.	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																						.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence		.	.	.	.																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	T	I	R	S	E	S	Q	I	I	G	L	E	T	G	D	E	R	N	T	E	K	V	R	D	Y	L	E	S	N	G	V	F	G	S	V	F	C	R	P	A	T	S	K	N	K	N	I	I	R	L	S	L	N	S	D	V	N	D	E	Q	I	A	K	I	I	E	V	C	S	D	A	V
Template Known Secondary structure		.	.	.	.							S	S								S														T	T								T	T	S	S		T	T										T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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