Job Description P00509 Confidence 99.74% Date Thu Jan 5 10:56:40 GMT 2012 Rank 219 Aligned Residues 329 % Identity 14% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	.	.	.	.	.	.	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T
Query Conservation																																															.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																															.	.	.	.	.	.																						.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.																																																										.	.	.	.	.
Template Sequence		D	T	L	E	M	I	A	S	.	.	.	.	.	.	.	E	N	F	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	.	.	.	.	.	V	Q	P
Template Known Secondary structure			S					T	T	.	.	.	.	.	.	.													T	S	G	G	G	G							T	T			S	S	S																					T		S				.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																																																										.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	.	.	.	.	.	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V
Query Conservation																																		.	.	.	.	.
Alig confidence																.	.																	.	.	.	.	.																		.
Template Conservation																.	.																																							.
Template Sequence		H	S	G	A	Q	A	N	A	A	V	L	H	A	L	.	.	M	S	P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	.	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I
Template Known Secondary structure		S	S													.	.			T	T								G	G	G	T			G	G	G	T		T	T	S					S	S								.		T	T	T		S																S
Template Predicted Secondary structure																.	.																																							.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.																																									.	.	.	.	.	.															.	.	.
Template Conservation												.	.	.	.	.	.	.																																									.	.	.	.	.	.															.	.	.
Template Sequence		A	G	W	S	A	Y	P	R	V	L	.	.	.	.	.	.	.	D	F	A	A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	A	D	.	.	.	.	.	.	V	V	S	T	T	V	H	T	L	G	G	G	R	S	.	.	.
Template Known Secondary structure					S	S			S			.	.	.	.	.	.	.													T								T	T	T						T	T	S	S			S	T	T	T		S	.	.	.	.	.	.													S		.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.																																									.	.	.	.	.	.															.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																																																							.
Template Conservation																				.	.	.	.	.	.	.																																																							.
Template Sequence		G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	.	.	.	.	.	.	.	P	G	Q	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	.
Template Known Secondary structure								G	G	G									T	.	.	.	.	.	.	.	T	T	T		S	S																	T	S																						S	S						T	T	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.																																																							.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.															370	.	.	.	.	.	.	.	.						.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	S	G	R	V	N	V	A	.	.	.	.	.	G	M	T	P	D	N	M	A	P	L	C	E
Query Conservation																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence		.	.															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	V	S	V	V	S	G	G	T	D	V	H	L	V	L	V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D
Template Known Secondary structure		.	.				G	G	G	S		S	S	S							T	T	S	S													T	T									T	T		S	S		T	T	T		S													T
Template Predicted Secondary structure		.	.
Template SS confidence
				307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		391	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	A	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	A	T	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions