Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 28 Aligned Residues 343 % Identity 20% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		E	N	I	T	A	A	P	A	D	P	I	L	G	L	A	D	L	F	R	.	.	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E
Query Conservation																					.	.
Alig confidence																					.	.														.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	R	S	A	V	D	P	F	I	V	X	D	V	X	E	A	A	R	R	A	E	E	A	G	R	R	I	I	H	X	E	V	G	.	.	.	.	.	Q	P	G	T	G	A	P	R	G	A	V	E	A	L	A	K	S	L	E	.	.	.	.	.	.	.	.	.	.	.	G	L	P	A	L	R	Q	R	I	A	R
Template Known Secondary structure			S	T	T						T	T													T	T									S	.	.	.	.	.	S		S	S		S														.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.												.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D
Query Conservation
Alig confidence																	.	.																		.	.
Template Conservation																	.	.																		.	.
Template Sequence		L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	.	.	V	I	T	P	G	S	S	G	G	F	L	L	A	F	T	A	L	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	L	R	A	L	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	V	P	A
Template Known Secondary structure													G	G	G		.	.				S	S													.	.			T	T								S												T	T										G	G	G	T	T	S
Template Predicted Secondary structure																	.	.																		.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V
Query Conservation
Alig confidence				.	.	.	.	.	.																																																											.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																																											.	.	.	.	.
Template Sequence		D	F	.	.	.	.	.	.	A	G	L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	.	.	.	.	.	L	E	L	T	D	E	C	Y	V
Template Known Secondary structure				.	.	.	.	.	.	T	T	S			S						S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S					G	.	.	.	.	.	G	G	T		S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.																																																											.	.	.	.	.
Template SS confidence
		156	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		I	N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V	R	V	V	E	R	I	A	Q	.	.	.	.	.	.	.	N	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	C	.	.	.	.	.	.	.	D	A	E	L	Q	A	N	L	D	V	Y	K	A
Template Known Secondary structure					S	S	S	T	T			T	T	S									G	G	G										.	.	.	.	.	.	.		T	T															T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	.	.	.	.	.	.	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D
Query Conservation																																				.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																		.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																.	.	.																																																											.
Template Sequence		N	R	K	L	X	L	E	R	L	P	K	A	G	F	.	.	.	T	R	I	A	P	P	D	G	A	F	Y	V	Y	A	D	V	S	D	L	T	D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	.	R	A	T	A
Template Known Secondary structure														T		.	.	.			B					B	T	T							T	T	T		S																				G	G	G	T		T	T	T	G	G	G								.	S
Template Predicted Secondary structure																.	.	.																																																											.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	A	P	L	C	E	A	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	E	E	G	L	D	R	L	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions