Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 72 Aligned Residues 341 % Identity 12% Template c3getA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution Resolution 2.01 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	P	I	L	G	L	A	D	L	F	R	A	D	E	R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A
Query Conservation
Alig confidence																												.	.	.	.	.																						.	.	.																					.	.	.	.	.
Template Conservation																												.	.	.	.	.																						.	.	.																					.	.	.	.	.
Template Sequence		N	Y	E	P	G	K	D	I	E	V	I	A	K	E	Y	G	V	K	E	V	I	K	L	A	S	N	.	.	.	.	.	E	N	P	F	G	T	P	P	K	A	I	E	C	L	R	Q	N	A	N	K	A	.	.	.	H	L	Y	P	D	D	S	X	I	E	L	K	S	T	L	A	Q	K	Y	K	.	.	.	.	.
Template Known Secondary structure																T	T		S						S	S		.	.	.	.	.			T	T		S												G	G	G	T	.	.	.	T	S				T	T													T	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.																						.	.	.																					.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E
Query Conservation
Alig confidence		.							.	.																		.	.																																					.	.	.	.	.
Template Conservation		.							.	.																		.	.																																					.	.	.	.	.
Template Sequence		.	V	Q	N	E	N	I	.	.	I	I	G	A	G	S	D	Q	V	I	E	F	A	I	H	S	K	.	.	L	N	S	K	N	A	F	L	Q	A	G	V	T	F	A	X	Y	E	I	Y	A	K	Q	C	G	A	K	C	Y	K	T	Q	S	I	T	H	.	.	.	.	.	N	L	D	E	F	K	K	L	Y	E	T
Template Known Secondary structure		.			G	G	G		.	.				S	S													.	.			T	T							S	S			T										T							S	S	S	S		.	.	.	.	.
Template Predicted Secondary structure		.							.	.																		.	.																																					.	.	.	.	.
Template SS confidence
			79	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	.	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N
Query Conservation																																																					.
Alig confidence																																							.														.																												.
Template Conservation																																							.																																										.
Template Sequence		H	K	D	E	I	K	L	I	F	L	C	L	P	N	N	P	L	G	E	C	L	D	A	S	E	A	T	E	F	I	K	G	V	N	E	D	C	.	L	V	V	I	D	A	A	Y	N	E	F	A	S	F	K	D	S	K	K	H	L	E	P	C	E	L	I	K	E	F	D	N	V	L	Y	L	G	T	F	S	L	.
Template Known Secondary structure		T	T	T	T								S	S		T	T	T															T	S		T	T	S	.							T	T									G	G	G												T	T										.
Template Predicted Secondary structure																																							.																																										.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		Y	G	L	G	G	L	R	I	G	Y	G	I	A	N	A	N	I	I	S	A	F	Y	K	L	.	.	.	.	.	.	.	.	.	R	A	P	F	N	V	S	N	L	A	L	K	A	A	V	A	A	X	D	D	.	.	.	.	.	.	.	D	E	F	T	E	K	T	L	E	N	N	F	S	Q	X	E	L	Y	K	E
Template Known Secondary structure			S		T	T	T																			.	.	.	.	.	.	.	.	.	S		T	T		S													T		.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.								.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.								.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																										.	.																							.	.	.	.	.	.	.
Query SS confidence																										.	.																							.	.	.	.	.	.	.
Query Sequence		T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																										.	.																							.	.	.	.	.	.	.
Alig confidence								.	.	.	.															.	.																							.	.	.	.	.	.	.						.	.
Template Conservation								.	.	.	.																																																			.	.
Template Sequence		F	A	K	K	H	N	.	.	.	.	I	K	I	I	D	S	Y	T	N	F	I	T	Y	F	F	D	E	K	N	S	T	D	L	S	E	K	L	L	K	K	G	I	I	I	R	N	L	K	S	Y	G	L	N	A	I	R	I	T	I	G	.	.	T	S	Y	E	N	E	K	F	F	T	E	F	D	K	I	L
Template Known Secondary structure						T	T	.	.	.	.							S	S	S							S	S	S											T	T	T							G	G	G	T		S								.	.
Template Predicted Secondary structure								.	.	.	.																																																			.	.
Template SS confidence
		292	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions