Job Description P00509 Confidence 99.56% Date Thu Jan 5 10:56:40 GMT 2012 Rank 233 Aligned Residues 259 % Identity 12% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																								.																															.	.	.
Query SS confidence																								.																															.	.	.
Query Sequence		V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	.	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	.	.	.	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W
Query Conservation																								.																															.	.	.
Alig confidence																								.																						.	.	.	.	.	.				.	.	.															.	.
Template Conservation																																														.	.	.	.	.	.																					.	.
Template Sequence		V	L	D	A	F	Q	E	N	K	V	S	D	F	H	F	N	P	S	T	G	Y	G	Y	D	D	E	G	R	D	T	L	E	R	V	Y	A	S	V	F	K	T	E	A	A	.	.	.	.	.	.	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	.	.	L	R	P	G	D	E	L	L
Template Known Secondary structure									T	T			G	G	G	G					T	T		T	T																T		S			.	.	.	.	.	.				T	T	S		S													.	.			T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.																					.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	N	P	S	W	P	N	H	K	S	V	.	.	.	.	.	.	.	.	.	.	.	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.														.	.																					.	.
Template Conservation																																						.	.																					.	.
Template Sequence		Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	.	.	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	.	.	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K
Template Known Secondary structure				S	S	S			T	T						T	S	S		S	S	S			T	G	G	G	T									.	.		T	T	S	S												T	T			.	.							S		T	T	S	S	S
Template Predicted Secondary structure																																						.	.																					.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		194	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		W	Q	T	L	A	Q	L	S	V	E	K	G	.	.	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A
Query Conservation														.	.
Alig confidence														.	.																		.	.	.	.								.	.	.	.	.																																.	.
Template Conservation																																	.	.	.	.								.	.	.	.	.																																.	.
Template Sequence		I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V	E	R	I	E	.	.	.	.	P	T	E	V	G	A	D	.	.	.	.	.	I	I	A	G	S	L	I	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	.	.
Template Known Secondary structure														T	T	S							T	T	T	T	T	T	S	S			.	.	.	.	G	G	G	T	T		S	.	.	.	.	.									T	T	T	T	T			S																.	.
Template Predicted Secondary structure																																	.	.	.	.								.	.	.	.	.																																.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N
Query Conservation
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation		.																												.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		.	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	.	.	.	.	.	.	.	.	.	.	L	A	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	.	.	.	.	V	E	A	D	P	L	W	D
Template Known Secondary structure		.				S		T	T	T	G	G	G					T	T											.	.	.	.	.	.	.	.	.	.																							T	T	.	.	.	.					S		T	T
Template Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
			251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.											.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions