Job Description P00509 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 68 Aligned Residues 319 % Identity 15% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.									.	.	.	.	.
Query SS confidence																																										.	.	.									.	.	.	.	.
Query Sequence		R	P	G	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	.	.	.	Y	L	G	I	D	G	I	P	.	.	.	.	.	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R
Query Conservation																																										.	.	.									.	.	.	.	.
Alig confidence												.	.	.	.	.																										.	.	.									.	.	.	.	.																								.
Template Conservation												.	.	.	.	.																																																																	.
Template Sequence		S	D	F	V	V	N	L	D	H	G	.	.	.	.	.	D	P	T	A	Y	E	E	Y	W	R	K	M	G	D	R	C	T	V	T	I	R	G	C	D	L	M	S	Y	F	S	D	M	T	N	L	C	W	F	L	E	P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	.
Template Known Secondary structure				S					S	S		.	.	.	.	.			G	G	G								G	G	G	G						T	T	T	T		S	S		S		T	T	S	S	S	T	T	S																	S	B			T	T	S			.
Template Predicted Secondary structure												.	.	.	.	.																																																																	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	.	.	.	.	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G
Query Conservation																												.	.	.	.
Alig confidence		.																		.	.							.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	V	G	T	G	S	T	Q	L	C	Q	A	A	V	H	A	L	.	.	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	K	K	G
Template Known Secondary structure		.																		.	.				S	S	S	S	S							S	S											T	T			T	T							S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S	S
Template Predicted Secondary structure		.																		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.															.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	I	E	L	V	T	S	P	N	N	P	D	G	T	I	R	E	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	A	K	V	I	H	D	F	A	Y	Y	W	P	H	Y	T	P	.	.	.	.	.	.	.	.	.	I	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G
Template Known Secondary structure									S	S		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.											T	T		S	T	T	T	S		.	.	.	.	.	.	.	.	.			S		B			S													G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	.	.	.	.	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T
Query Conservation																																																									.	.	.	.
Alig confidence													.	.	.	.	.	.																																							.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		S	R	I	G	W	A	L	V	K	D	K	.	.	.	.	.	.	E	V	A	K	K	M	V	E	Y	I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T	C	K	S	E	S	E	S	E	N	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V
Template Known Secondary structure		G											.	.	.	.	.	.															S	S																					T			S	T	T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.													.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.										.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	M	A	P
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence							.																				.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.						.
Template Conservation							.																																																																		.
Template Sequence		V	K	E	S	D	.	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y	F	G	K	S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	L	V	S	E	L	R	R	H	K	V	M	S	R	A	G	E	R	C	G	S	D	K	K	H	V	R	V	S	M	L	.	S	R	E	D	V	F	N	V
Template Known Secondary structure				T	S	S	.	S												T	T	T	T								S							S	S	S									T	T	T						T	G	G	G	T	S		T	T						S		.	S
Template Predicted Secondary structure							.																																																																		.
Template SS confidence
		298	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.
		388	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	E	A	I	V	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	E	R	L	A	N	M
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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