 |
Job Description | P00509 | Confidence | 20.35% | Date | Thu Jan 5 10:56:40 GMT 2012 |
Rank | 413 | Aligned Residues | 53 |
% Identity | 15% | Template | c3bdkB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:d-mannonate dehydratase; |
PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue
|
Resolution | 2.50 Å |
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | T | L | D | F | D | A | L | I | N | S | L | N | E | A | Q | A | G | D | V | V | L | F | H | G | C | C | H | N | P | T | G | I | D | P | T | L | E | Q | W | Q | T | L | A | Q | L | S | V | E | K | G | W | L | P |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|
|   |   |
|
|
|
|   | . |
|   |   |
|
|
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
Y | G | K | K | D | P | V | T | L | E | E | I | K | A | I | P | . |
G | M | Q | G | I | V | T | A | V | Y | D | V | P | V | G | Q | A | W | P | L | E | N | I | L | E | L | K | K | M | V | E | E | A | G | L | E | I |
Template Known Secondary structure |   |
|
| T | T |
| S | S |
|  |  |  |  |  | T | S | T | . | T |  |  |  |  |  |  |
|
|
| S | S |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|