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Job DescriptionP00509
Confidence100.00%DateThu Jan 5 10:56:40 GMT 2012
Rank24Aligned Residues364
% Identity18%Templatec3b46B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ....... .30.........40.........50.........60.........70........
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Query Sequence  NITAAPADPILGLADLFR. . . ADERPGK. . INLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCT
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Template Sequence  YFTSNTAKDVWSLTNEAAAKAANNNQGRELINLGQG. . . . . FFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSL
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S

TT

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TTSGGGGS


TT

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   25....30.........40.........50.........60 .........70.........80.........90.........
 
   7980.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  QELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDA. . . . . .
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Template Sequence  IKLYSPIYNTELKAENV. . TVTTGANEGILSCLMGL. . LNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQR
Template Known Secondary structure  TTS


GGG..S..

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TTTT


TTTTTS
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   102.......110........ .120.........130..... ....140.........150.........160.........170.......
 
   153......160.........170.........180.........190.........200.........210.........220........
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Query Sequence  . . . . ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGL
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Template Sequence  NTRGEEWTIDFEQFEKAI. . . TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS. . FTRI
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B
GGGS
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TTTT
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   178.180.........190..... ....200.........210.........220.........230.........240........ .250..
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  RAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWE
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Template Sequence  ATLSPEIGQLTLTVGSAGSFAATGWRIGWVLSLNA. . . . . . ELLSYAAKAHTRICFASPSPLQEACANSIN. . . . DALKI
Template Known Secondary structure  GGS
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   253......260.........270.........280....... ..290.........300.........310....... ..320..
 
   309310.........320.........330.........340.........350.... .....360........
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Query Sequence  QELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT. . . . . . . . . . . . . . . . . . . . KEQVLRLREEFGVY
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Template Sequence  GYFEKMRQEYINKFKIFTSIFDELG. . . . LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVV
Template Known Secondary structure  TT....



SBSS
TTS


TT



GGGTSS

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   324.....330.........340........ .350.........360.........370.........380.........390.........
 
   369370.. .......380.........390......
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Query Sequence  AVAS. . . . . . . . . . . . . . . GRVNVAGMTPDNMAPLCEAIVAVL
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Template Sequence  AIPPTEFYIKEHEKAAENLLRFAVC. KDDAYLENAVERLKLLK
Template Known Secondary structure 
B
GGGGS
GGGGGGGTT

.S
GGGG
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   400.........410.........420.... .....430.........440.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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